Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1002 ATGGCGTCGTTTCTTCCTTCCAGATCAGAACCTCTCGTCGATCTATCTACAAGAGAAGCGGATGACGCAAGTCCTGCTGTTAAAGACGTGTTACTGGTTATTGATTCTTTAAAGAAACATGTTGCTGCTGAACGGGTTGTTTCCGTAAAGAAAAGAATGGAAGAAAATAGACAGAAGCTGGTTGGTGTCACAAACCATCTCTACAATACATCTATGGACAGAAGGACCTGCAACATTACTGATTCACACAGTAGTCTGGACCTACTGGAAAAAAGGCAAAAAGAAGCAATGGATATGCACAATGGTGTTCATGAAAGTAATGGTGATACAGAGAGCAATGGCTATCATGAAGATAGCCATGGTTCTACAGCAGTTCTTCTGGGATCTAATGTTGCTGTCAAGAATGCTGTTCGCCCTATCAAGTTACCTGAAGTAAAAAGATTACCTCCTTACACCTCATGGATTTTTCTGGACAGGAATCAAAGAATGACAGAGGATCAGTCGGTGGTGGGTCGGAGACGAATCTATTATGATCAAAATGGCGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAACAATGGAGGATGAAGAGGACAAAAGAGAGTTTTTAGAATCAGAAGATTATATACTTCGCATGACTGTCAGAGAAATTGGTTTATCTGACATTGTTCTGGATTTGCTGGCACAGTGTTTTTCTAGAACCACTACTGAAATTAAGGCAAGATATGAAACTCTTAGTAATGAAGACAATGCTGGTGGTGGTTCCAAGAATGCAAATACCGAAGAGAATTCTAAATGTGGAAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTTTTTTGCCGACGATGTCTTGTTTTTGATTGCAGGTTACATGGATGTTCACAGGATCTTGTCTCTCCTGCTGAGAAGCAATCTATGTGGACCCCTACTGATACGGAAAGTGCACCTTGTGGGCCAAACTGTTTTCAATTGGTACTTAAATCAGAAAGATTTTCTAAAGCCCCCTCTACTTCCCAGGCTGGTTCAGAAGAGAAAAGCTCTGGTGGTTCTTCATCTAGGAAGAAGTCTTCTGCTAGAAGGCAGATGAAATGCAGCCAAAGCGAAAATGCTTCATCTAATGCAAAGAACATTTCTGAGAGTATTGACTCAGAGAATGGTCCTGGGTGGGATGCTGTTTCAGCTTCTCATTTGGCACCACCAACAACTAAATCCGTTGGGAGAGGTGGAATTGGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGCGGCAGAAGAAAACTGTGGCCTCTGATTCTGATTTCATTGGTGGAGCTCTTGACCAGTCATCGGATGACATGGTTACTACTGACTCACCAGTCATGAGCAGTGAAGACAACTTGAGGAAGGAAGAGTTAGTGGATGAAAACATTTGTAAACAAGAACCCACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTCTGGAGAAAGGAATGGAAATTTTTGGTAGAAACAGTTGCTTAATAGCCAGGAATCTCTTGAATGGTGTAAAGACTTGTTGGGAGGTATTCCAACACATTAATTGCGAAGAAGGAAAGATGTCAGGTCCTGGCGGGGATGCTGAAAATTATTTTCTCGAAGGTTATTCCAAGGGTAATAATGAAGTGAGGCGAAGGTCAAGATTTTTACGTAGAAGAGGAAAAGTTCGTCGCTTGAAATATACCTGGAAATCTGCTGCTTACCATTCAATCAGGAAAAGGATTACCGACAAGAAGGATCAGCCCTGCCGGCAGTACAATCCTTGTGGTTGCCAAACAGCTTGTGGAAAGCAGTGTCCTTGTCTTCTAAATGGAACATGCTGTGAGAAGTATTGTGGGTGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGTCAATGTCCATGCTTTGCGGCAGATAGAGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGTGATGGTACTCTTGGGATTCCTAGCCAAAGAGGTGATAACTATGAGTGTAGAAACATGAAACTTCTTCTCAAACAGCAGCAGAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGGTGGGGAGCGTTCCTAAAGAATAGTGTTGCCAAGCATGAGTACCTTGGAGAGTATACTGGAGAGTTAATTTCTCATCGGGAGGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTATTCAATCTGAATGATCAGTTTGTTCTTGACGCTTATCGGAAGGGAGACAAATTGAAGTTTGCGAACCATTCTCCCGATCCAAATTGTTATGCAAAGGTTATCATGGTTGCTGGGGATCATAGGGTAGGCATTTTCGCCAAGGAAAGGATCGGCGCTGGAGAGGAACTGTTTTATGATTACCGATATGAGCCTGATAGAGCACCTGCTTGGGCTCGGAAGCCAGAGGCATCTGGATCAAAAAAAGATGATGGTGCACCATCAAGTGGTCGTGCAAAGAAGCTTGCTTAG 2574 0.4281 MASFLPSRSEPLVDLSTREADDASPAVKDVLLVIDSLKKHVAAERVVSVKKRMEENRQKLVGVTNHLYNTSMDRRTCNITDSHSSLDLLEKRQKEAMDMHNGVHESNGDTESNGYHEDSHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTSWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEETMEDEEDKREFLESEDYILRMTVREIGLSDIVLDLLAQCFSRTTTEIKARYETLSNEDNAGGGSKNANTEENSKCGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVSPAEKQSMWTPTDTESAPCGPNCFQLVLKSERFSKAPSTSQAGSEEKSSGGSSSRKKSSARRQMKCSQSENASSNAKNISESIDSENGPGWDAVSASHLAPPTTKSVGRGGIGKRNSKRVAERVLVCMQKRQKKTVASDSDFIGGALDQSSDDMVTTDSPVMSSEDNLRKEELVDENICKQEPTDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGVKTCWEVFQHINCEEGKMSGPGGDAENYFLEGYSKGNNEVRRRSRFLRRRGKVRRLKYTWKSAAYHSIRKRITDKKDQPCRQYNPCGCQTACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVAKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERIGAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSSGRAKKLA* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1002 857 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 857 IPR025778 GO:0031519
Lan18g1002 857 Gene3D SET domain 608 825 IPR046341 -
Lan18g1002 857 Pfam CXC domain 646 677 IPR041355 -
Lan18g1002 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 16 451 IPR045318 GO:0006338|GO:0018024
Lan18g1002 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 462 855 IPR045318 GO:0006338|GO:0018024
Lan18g1002 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 16 451 - -
Lan18g1002 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 462 855 - -
Lan18g1002 857 SMART sant 492 542 IPR001005 -
Lan18g1002 857 SMART sant 200 250 IPR001005 -
Lan18g1002 857 MobiDBLite consensus disorder prediction 831 857 - -
Lan18g1002 857 MobiDBLite consensus disorder prediction 341 364 - -
Lan18g1002 857 SUPERFAMILY SET domain 582 828 IPR046341 -
Lan18g1002 857 MobiDBLite consensus disorder prediction 831 850 - -
Lan18g1002 857 SMART set_7 708 829 IPR001214 GO:0005515
Lan18g1002 857 MobiDBLite consensus disorder prediction 341 422 - -
Lan18g1002 857 ProSiteProfiles CXC domain profile. 594 693 IPR026489 -
Lan18g1002 857 ProSiteProfiles SET domain profile. 708 823 IPR001214 GO:0005515
Lan18g1002 857 Coils Coil 188 208 - -
Lan18g1002 857 CDD SET_EZH 708 824 - -
Lan18g1002 857 Coils Coil 855 857 - -
Lan18g1002 857 MobiDBLite consensus disorder prediction 371 392 - -
Lan18g1002 857 Pfam SET domain 719 822 IPR001214 GO:0005515
Lan18g1002 857 SMART CXC_2 642 679 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1002 Lan-Chr18 15052576 15060817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1002 697 826 C2H2 Transcription Factor Family AT2G23740 27.211 3.52e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan18g1002 SET 2.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1002 18 15052576 15060817 Lan18g1002 18 15052576 15060817 ECH
Lan17g1286 17 21098815 21107321 Lan18g1002 18 15052576 15060817 LSH
Lan18g1002 18 15052576 15060817 Lan6g1422 6 19044982 19062117 LSH