Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1001 ATGCTCTCACCAACAATTTTTTGGCCCAAAGCACCCAACAAAGTTAGAAATTATGAGCTACCAAGCTTGAAGCTTGTTTTAGGCACTTCGATTTATTCCACACCCGTTGCAGCGGCGCGTGCATACGACACCGCCGTCTTCTACCTCCGTGGCCCTTCAGCTCGTCTCAACTTCCCTGACCTTCTAACTCGCGAAAACGGTGCCGTTCTTGCTAACTCTGACATGTCGGCGGCTTTTATTAGAAAGAAAGCGACTGAGGTCGGTGCCAGAGTTGATGCACTCCAAGCCACCCACCACCACCGCCATGTTGCGGTGCCTCCGGAGCTTATATCTGACGCCGGCGACAACCGCTCTAGCAAATTCGCGAACCTGGTTGACCTGAATAAAATACCCGAACCCGAGAATTCGGATTATGAATTAGGAGGAAGAGAATGA 435 0.508 MLSPTIFWPKAPNKVRNYELPSLKLVLGTSIYSTPVAAARAYDTAVFYLRGPSARLNFPDLLTRENGAVLANSDMSAAFIRKKATEVGARVDALQATHHHRHVAVPPELISDAGDNRSSKFANLVDLNKIPEPENSDYELGGRE* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1001 144 SMART rav1_2 15 65 IPR001471 GO:0003700|GO:0006355
Lan18g1001 144 SUPERFAMILY DNA-binding domain 27 60 IPR016177 GO:0003677
Lan18g1001 144 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 31 137 - -
Lan18g1001 144 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 31 137 - -
Lan18g1001 144 Gene3D AP2/ERF domain 12 60 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1001 Lan-Chr18 15049392 15050124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1001 8 140 AP2-EREBP Transcription Factor Family AT5G67190 44.654 9.46e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1001 K09286 - gmx:100783682 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1001 18 15049392 15050124 Lan18g1001 18 15049392 15050124 ECH