Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0997 ATGGCCGTGGAACTCATGATGGGTTACATAAACGATAACTTAGCAGCCAAAAGCGAAGAAAATGCTGTTCAAGAAGCAGCTTCAGGGTTAGAGAGTGTTGAGAAACTCATCAGATTGCTATCACAAACAAAGACTCAACAACAACAACAATTTCAGAACTCTTCTTCCATGCAAATTGAGATGGACTCTGTAGCTGACGTGGCTGTTTCCAAGTTCAAGAAAGTGATTTCTCTTCTGGGTCATAACAGAACCGGTCATGCTCGTTTCAGAAGAGCACCTTTGCCCCCTCACAACCCTCAAAAACAACAACAACCATTGGAACACGATAGGGTTTATCATGCTACACCATTGCAGCAAATCCCACCAACCATTCAAACTATAGTACCCAAAAACGGAGCTATTATTGAGAGGAAAGACTCATCGAAGACCTTAAATTTCTCGTATTCATCTGCTGCAAACTCATTCATATCGTCCCTCACCGGTGACACTGATACAAAACATCCTTGTTCTTCGTCGCCGGCGACTGCTTTTCAGATCACGAATCTAAATACTGGAAAACCTCCACTTTCTTCATCTTCATTCAAGAGGAAGTGTAGCTCTGAGAACATGGGTTCTGGAAAGTGTGGTAGTTCTTCTAGCCGCTGTCATTGTTCAAAGAAGAGCAGAAAAATGAGGTTGAAGAGAGTGGTGAGGATACCAGCAATAAGCTTAAAGATGTCTGATATTCCACCTGATGATTATTCTTGGAGGAAGTATGGACAAAAACCCATTAAAGGATCCCCTCATCCACGGGGTTATTACAAGTGCAGCAGTGTTAGAGGGTGCCCAGCAAGAAAACATGTAGAGAGAGCTTTGGATGATCCATCTATGCTTGTTGTCACATATGAAGGCGAGCATAATCATTCACTCTCTGCAGCTGAAGCTACTAATCTCATATTAGAATCCTCTTAA 951 0.4238 MAVELMMGYINDNLAAKSEENAVQEAASGLESVEKLIRLLSQTKTQQQQQFQNSSSMQIEMDSVADVAVSKFKKVISLLGHNRTGHARFRRAPLPPHNPQKQQQPLEHDRVYHATPLQQIPPTIQTIVPKNGAIIERKDSSKTLNFSYSSAANSFISSLTGDTDTKHPCSSSPATAFQITNLNTGKPPLSSSSFKRKCSSENMGSGKCGSSSSRCHCSKKSRKMRLKRVVRIPAISLKMSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAAEATNLILESS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0997 316 Gene3D WRKY domain 229 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan18g0997 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 316 IPR044810 GO:0003700
Lan18g0997 316 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan18g0997 316 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan18g0997 316 Coils Coil 30 50 - -
Lan18g0997 316 Pfam WRKY DNA -binding domain 245 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan18g0997 316 SUPERFAMILY WRKY DNA-binding domain 241 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan18g0997 316 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 15 316 - -
Lan18g0997 316 Pfam Plant zinc cluster domain 195 241 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0997 Lan-Chr18 15032237 15033903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0997 1 301 WRKY Transcription Factor Family AT2G24570 41.641 1.80e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan18g0997 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0997 - - qsu:112030051 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0997 18 15032237 15033903 Lan18g0997 18 15032237 15033903 ECH
Lan18g0997 18 15032237 15033903 Lan1g0403 1 3219197 3220249 PCT
Lan6g1434 6 19636578 19638769 Lan18g0997 18 15032237 15033903 PCT