Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0992 ATGGAGCAAATGATTGAAACTACTAAGAAAAAGGCGCTAATTGATATTGTTAGATTGGTACAAAAAAGAGGCCTCAAAGGTAAACTCGGAGATTGGAAACAATTTCTGAACAGTTATGATAAAAAGTTTGGTTCTAATTTGAGCGATCCTTCAAAAAGGTCACATGAGGTTTTGGCTGCATTTCTCAACACTTTTCACGAACAAGAACATTTGAAGTTTTTGTACAACATAATGCAACAACATTCAAATAAAGAAATACTGGGGCAGTTGAAAGATAAGTCTCATGATTCCCCTGAGCAGAGGCTAGTCCAAGAAACTCTCCAGAACCCAGCATATCCATTGGATTATTCATTTAAACCACTTAATGAGGTGTGGGAGGTTATAAACCTTAAAGATATGAACAAGGCAATCAAATATACTTCAATGGTTGCTGTTGACTGTGAAATGGTTCGCTGTGTAGATGGAACTGAAGCATTGGTAGAAGTCTGTGTAGTTGACCGCAATTTAAAGGTCAAACTGCATGAACGTTTAAGACCCAACAAAGCAATTGCAGACTACAGAACAGATATAACTGGTGTCTCTTCTCAAGATCTAGAGGGTGTAACTTGCTCCTTGGCAGATATCCAAGAATCCATGAAAAAGCTGTTATCAGATGGAACCATATTAGTGGGACATGGTTTATATAATGACCTACGTGTGCTGAAGTTAGATCATGTTAAAGTGATTGACACTTCATATATCTTCCAAAATTTGGATGGACCTATTCACAGGAGGCCTTCTCTGAGTAGCTTATGCAAGGCTGTGTTAGGCGATGATGTTCGGGAAAAGGGTGCTACACATAGTTGTCTAGATGATGCATGTGCAGCAATGAAACTTGTTCTTGCTAAGATCGAGCTTGGTGTTGATAGAGTGATTCCTTTGATTGAAGAGCCTATTCCTGAAAGTGAGATTGCAAAGCTTCTTCTTCACGGGATACCTACCAGTGTGAAAAGTGAAGAACTACATAGTGTTCTTCCTGGAGACTTCACAATACAACTGAAGAATTCTAAGAAAGGTCGGGGAGAAAAGTATTCTGCCTTTGCAATTTTTAAGAACCCACGGGAGGCACTTCAAGCTTATGAAAATGTCCAAGGCAGCCAAGAGAAGGATACTGCACAACGCCCACAGAAACTTGTCAAGTTTAAGCTTGGCACCGGTAAGACTGCCAGTCTATACGTTCGGAAAATGGCACCTGATGGCCATGACCAGATTCCTCCTAAGAGAGCTTTAGAAGTGAATAATGATGCATTTGATGTCTCCAAGAAAGCAAAGATGGGTCCTAACTCAAATGACACATACATCGATGCTCTTAAGAAGGAGATTGAAGCATTAAATCAACAACTGAAGGAAAAGGACATGTTGATTGAATTGTTGCAGAAACAGTTGAAACAAAATGATTTTGGAATTTCCAAGCTGCATAATAAAATGGTACTCCCGAAAAAAGAAAGAGAATGA 1494 0.3929 MEQMIETTKKKALIDIVRLVQKRGLKGKLGDWKQFLNSYDKKFGSNLSDPSKRSHEVLAAFLNTFHEQEHLKFLYNIMQQHSNKEILGQLKDKSHDSPEQRLVQETLQNPAYPLDYSFKPLNEVWEVINLKDMNKAIKYTSMVAVDCEMVRCVDGTEALVEVCVVDRNLKVKLHERLRPNKAIADYRTDITGVSSQDLEGVTCSLADIQESMKKLLSDGTILVGHGLYNDLRVLKLDHVKVIDTSYIFQNLDGPIHRRPSLSSLCKAVLGDDVREKGATHSCLDDACAAMKLVLAKIELGVDRVIPLIEEPIPESEIAKLLLHGIPTSVKSEELHSVLPGDFTIQLKNSKKGRGEKYSAFAIFKNPREALQAYENVQGSQEKDTAQRPQKLVKFKLGTGKTASLYVRKMAPDGHDQIPPKRALEVNNDAFDVSKKAKMGPNSNDTYIDALKKEIEALNQQLKEKDMLIELLQKQLKQNDFGISKLHNKMVLPKKERE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0992 497 SUPERFAMILY Ribonuclease H-like 142 297 IPR012337 -
Lan18g0992 497 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 413 - -
Lan18g0992 497 CDD REX1_like 143 294 IPR034922 -
Lan18g0992 497 Pfam Exonuclease 143 292 IPR013520 -
Lan18g0992 497 PANTHER SMALL RNA DEGRADING NUCLEASE 1-RELATED 1 413 - -
Lan18g0992 497 Gene3D - 138 305 IPR036397 GO:0003676
Lan18g0992 497 Coils Coil 447 474 - -
Lan18g0992 497 SMART exoiiiendus 141 302 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0992 Lan-Chr18 14992398 14997052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0992 87 292 C2H2 Transcription Factor Family AT2G48100 29.075 3.03e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0992 18 14992398 14997052 Lan18g0992 18 14992398 14997052 ECH