Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0977 ATGGACAGCAGTTGTTGTAAATCTCTCAGCAAAACCAAGAGTCTAACTCCAGCGCCACCTCCTTTACCTCCAGCAGCAAACGTTTGTTCCTCTAAGTGTCTGCTGAAGAATAATTACGCATCAAGAGGACGCAGCTATGTCTCTTCAGCAACTAAAGATCTTTGGGGGCGTCTTTTTTCTGAAGGTTATAAGGCAGATGTTTGCATTAATACTGAAAACGGTGGTGTTGTTTATGCCCATTCTAACATTCTTGCCATGACTTCTCCTGTATTAAGAGGCATGCTGAAGCAAGCTAAACGTCTTGACCGGTGGCGATCAATCTTAATTTCTGGGGTTCCACATGATGCAGTTCGAGCTTTTATCCAATTCTTGTACTCTTCTTGTTACGAGAAAGAAGAAATGGAGGAATTCATCCTACCTTTGTTAGTGCTGTCACATGTATATGTGGTCCCTCACTTGAAGAGCGAATGTGAACAGAAGCTAGAGTTGGATGTACTCACAATAGATAATGTAGTTGATGTATTTCAACTTTCATTACTATGCGATGCTCCACGGCTCAGCCTCATTTGTCACCGTATGATGCTAAAAAATTTCAAAGCTGTTTTGGAGTCAGAAGGATGGAAAGCAATGAAACAGAGCCACCCAGTTTTAGAAAAGGGAGTTCTACTGTCCGTGGCGGAAGAAGAAAATGCAAAAAGTGAGAGGATCAGAAAATTGAATGAAAGGAAGACCTACCTGCAATTATATGAAGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTAAAACCATTGGTCCTCATGATAAAGACCTCAAAGCAAACCAGCCATGTAAATATACAGCATGCAAGGGACTAGAATTGCTTGTTCGTCATTTTGCTGGCTGCAAGCCAAGAGTCCCAGGAGGCTGTGTTCACTGCAAGAGAATGTGGCAACTTTTGGAGCTACACTCTAGACTTTGTGCTGATCCAGATTATTGCAGAGTTCCTTTGTGCAGGAACTTTAAGCAGAGGATATTAAAACAAAGCAAGAAAGACGAAACTAGATGGAAAATATTGGTCGAAAAGATCTTGAGAACAAAAGGCGTTGGTATAGCGCCATGGTTTCGGCCACAATGTGGATATAGAATATTATAG 1140 0.4149 MDSSCCKSLSKTKSLTPAPPPLPPAANVCSSKCLLKNNYASRGRSYVSSATKDLWGRLFSEGYKADVCINTENGGVVYAHSNILAMTSPVLRGMLKQAKRLDRWRSILISGVPHDAVRAFIQFLYSSCYEKEEMEEFILPLLVLSHVYVVPHLKSECEQKLELDVLTIDNVVDVFQLSLLCDAPRLSLICHRMMLKNFKAVLESEGWKAMKQSHPVLEKGVLLSVAEEENAKSERIRKLNERKTYLQLYEAMEALVHICRDGCKTIGPHDKDLKANQPCKYTACKGLELLVRHFAGCKPRVPGGCVHCKRMWQLLELHSRLCADPDYCRVPLCRNFKQRILKQSKKDETRWKILVEKILRTKGVGIAPWFRPQCGYRIL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0977 379 CDD BACK 167 210 - -
Lan18g0977 379 SUPERFAMILY TAZ domain 242 340 IPR035898 -
Lan18g0977 379 SMART TAZ_2 242 334 IPR000197 -
Lan18g0977 379 Gene3D Potassium Channel Kv1.1; Chain A 43 164 IPR011333 -
Lan18g0977 379 Gene3D - 166 240 - -
Lan18g0977 379 SMART BTB_4 65 165 IPR000210 GO:0005515
Lan18g0977 379 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 6 372 - -
Lan18g0977 379 ProSiteProfiles BTB domain profile. 65 133 IPR000210 GO:0005515
Lan18g0977 379 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 372 IPR044513 -
Lan18g0977 379 Pfam BTB/POZ domain 58 162 IPR000210 GO:0005515
Lan18g0977 379 Gene3D TAZ domain 241 361 IPR035898 -
Lan18g0977 379 SUPERFAMILY POZ domain 48 161 IPR011333 -
Lan18g0977 379 Pfam TAZ zinc finger 249 333 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0977 Lan-Chr18 14897552 14901284 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lan18g0977 BTB 3.2e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0977 - - lja:Lj2g3v1968190.1 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0977 18 14897552 14901284 Lan18g0977 18 14897552 14901284 ECH