Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0973 ATGGGGAAGAAACAGCACAGCAAAGATAGAATGTTCATCACGAAAACAGAGTGGGCAACTGAATGGGGAGGTGCCAAATCGAAAGAGATTCGAACCCCTTTTAAACGTCTTCCTTTCTATTGTTGCGCCCTTACTTTCACCCCTTTTCAGTATCCTGTTTGCACTTCTGATGGCACTGTTTTTGATGTTATGAGCATAACTCCTTATATTGTTAAATTTGGAAAACATCCTGTCACTGGAACCCCTCTCAAGCAGCAAGATCTAATTACACTTACTTTCCACAAGAATTCTGAAGGAGAATATCAGTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACACATATTGTGGCGGTGAAGACCACAGGAAATGTGTTCTGCTATGAGGCCATCAAGGAATTAAACATCAAGACAAAAAACTGGAAGGAGCTCCTCACTGATGAGCCATTCACTAGGGATGACCTTATAACTATTCAGAATCCCAATGCACTCGACAGCAAGATTCTTTTGGATTTTGATCATGTTAAAAATAGTTTGAAAATTGATGATGAAGAACTACAGAGAATGAGTTCAGATCCAACATATAACATAAACGTGTCAGGAGATATCAAGCAAATGCTTAAGGAGCTTGGAACTGAGAAAGGAAAGGAAGCCGCAATGCTTGGGGGAGGTGGTAGCAAGGCGCAAAAAGAAAGGGCTGCTGCACTTGAAGCCATCTTAGCTGCAAGGTCGCGTGTTAAAGATGATTCTGAATCAAATCCAAATGGAGAGGTCAAAGCATCTCAAGCACTTAGTATTGTAGATGCTGCATCAGCTTCTGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAGGTGATAAAACTGCTGCTAGAATAGCTATGCACGTAGCTGGTGACAGGGCCCCGGTGAACGCAAAGATGGTCAAAAGTCGTTTCACTACTGGTGCTGCTTCGCGGTCTTTCACTTCAACATCATTTGATCCAGTTACAAAAAATGATTTTGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAAGGATATGTACAACTGCATACAACACATGGTGATTTGAACATTGAGCTGCACTGTGATATAACACCTAGGGCATGTGAGAACTTTATCACACTTTGTGAACGTGGATATTATAATGGAGTTTCCTTCCATAGAAGCATTCGGAATTTTATGATACAAGGTGGGGATCCTACTGGTACAGGTAAAGGAGGTGAATCCATATGGGGAAAGCCTTTTAAAGATGAACTGAACTCCAAATTAGTTCACTCTGGAAGGGGTGTGGTTAGCATGGCAAACAGTGGCCCACACACTAATGGTTCTCAGTTTTTCATCTTGTACAAGTCTGCAAATCATTTAAACTTCAAACATACAGTTTTTGGAGGAGTTGTTGGAGGCATGACTACACTGGCAACAATGGAAAAGGTTCCTGTTGATGACAGTGACCGACCTCTGGATGAAATCAAGATAACAAGTGTCACAGTTTTTGTCAATCCTTATACCGAACCAGATGAGGAACAACAGCAGGATAATACCGAAGAGAAGAACACAGTGGATGAAGATAATGAAAGGGTTGGGTCCTGGTTTAGCAATCCTGGTGCTGCAATATCCGAATCTGGAGGCACGGGGGTAGGTGGCGGCTGCGGTGTTGGCAAGTACTTGAAAGCGAGGAATGCTCAAGTTCAAGCTGAATCTGCTACTGTTGACACCAGTGTTGGAAAGAAAAGAAAGGTAGGAGTTGCCAGTAGTGAATTTAAAGATTTTTCAAGATGGTAA 1794 0.4192 MGKKQHSKDRMFITKTEWATEWGGAKSKEIRTPFKRLPFYCCALTFTPFQYPVCTSDGTVFDVMSITPYIVKFGKHPVTGTPLKQQDLITLTFHKNSEGEYQCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTDEPFTRDDLITIQNPNALDSKILLDFDHVKNSLKIDDEELQRMSSDPTYNINVSGDIKQMLKELGTEKGKEAAMLGGGGSKAQKERAAALEAILAARSRVKDDSESNPNGEVKASQALSIVDAASASVHGRSAAAAKASSGDKTAARIAMHVAGDRAPVNAKMVKSRFTTGAASRSFTSTSFDPVTKNDFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFITLCERGYYNGVSFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGMTTLATMEKVPVDDSDRPLDEIKITSVTVFVNPYTEPDEEQQQDNTEEKNTVDEDNERVGSWFSNPGAAISESGGTGVGGGCGVGKYLKARNAQVQAESATVDTSVGKKRKVGVASSEFKDFSRW* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0973 597 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 385 402 IPR020892 GO:0003755|GO:0006457
Lan18g0973 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 595 - -
Lan18g0973 597 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Lan18g0973 597 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Lan18g0973 597 CDD cyclophilin_RING 350 508 - -
Lan18g0973 597 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Lan18g0973 597 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 501 IPR002130 GO:0000413|GO:0003755
Lan18g0973 597 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 595 IPR044666 -
Lan18g0973 597 Gene3D - 331 516 IPR029000 -
Lan18g0973 597 SUPERFAMILY RING/U-box 37 104 - -
Lan18g0973 597 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Lan18g0973 597 SUPERFAMILY Cyclophilin-like 350 513 IPR029000 -
Lan18g0973 597 MobiDBLite consensus disorder prediction 506 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0973 Lan-Chr18 14867306 14872319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0973 1 597 U-box Gene Family AT5G67530 74.007 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0973 K10598 - gmx:100785814 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0973 18 14867306 14872319 Lan18g0973 18 14867306 14872319 ECH