Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0970 ATGGCTGCTACTAGTCCAATAAAGCCACCAATGTCTCTTAAAAGCCAAGGAGAAACTTGGCTTTCACGTGCTACAACTTGTGACCAGTTTTTCAGTTATGGCACAAGAGTGAGAACTAGAAGGTTCTGTAGTTGTGGTTGTGTTTCCAGGTTACAAAGGAGAAGAAAGGAAGAGTTTTTGTTGAAAGGGTGTTGGTGTGACCAAGCTAGTAGCAATGAAGACTATGGTGTGACAGAGGAAGATAAAGAGTTTGTGAAGGTTCTTTCAGAAGCACAACCTTATATTGCAGTGCATAGGGATAGTGTGTTTGTTGTGCTCATCTCTGCAGAAATTGTTGCTGGTCCTTACTTGGATCCCATTCTCAAGGATATAGCATTCCTTCATCACCTGGGAATTCGGTTTGTTCTTGTTCCGGGGACTCATGTTCAAATAGACAAGCTTCTCAAGGAGAGAGGGAGCAAGCCTAAGTATGTTGGTAGGTATAGAATAACTGATGATGAGTCTCTCGCTGCTGCAATGGAAGCTGCAGGGGGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGGCCCTCCATATGCAATATTCGTCGACATGGTGACAATAGCCGCTTGCACGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCCGCTAAGAGAAGAGGGGTTGTCAATGGAATTGATTTTGGGTCAACTGGAGAAGTTAAAAAAGTAGATGCATCTCGAATGCGTGAAAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATGCGTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCTGACAAGTTAATATCTATTATAGATGGCCCTATACTTGATGAGAGTGGACGCCTAATTCGTTTTTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGAGCTGCCCAAAGTGAAACAGCTGCTAACTATGTAAAAGCCATTGATGAAGAAGTTCTCAACTCTCTTGAGCATAACCATTTTAATGGGACAGTCCAATCTCCACCCAATGGAAAACCTTCTACAGAATGGAATAATGTAACCTTTCATAATGGTGTTGGTTTTGACAATGGAAATGGCCTAGGGTCTGGTGAGCAAGGATTTGCTATTGGAGGTCAAGAGAGGCTAAGTCGAACGAATGGTTATCTCTCAGAATTGGCAGCTGTGGCTTTTGTTTGTAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGCGGAGTTTTATTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTCGCTAGTGACCTTTATGAAGGCACACGAATGGCACGGATAACAGATATTTCTGGAATAAAGCAAATTATTCAGCCCTTGGAGGCATCTGGCATATTGATTAAACGGACTGATGAAGAGCTTCTAAAATCTTTGGATAACTTCGTTGTTGAGGAAAGAGAAGGTCAAATAATTGCTTGTGGTGCACTTTTTCCTTTTTTTGAGGAGAAGTGTGGAGAGGTTGCTGCTATTGCAGTATCTCCCGATTGTCGCGGCCAAGGACAGGGAGACAAGTTGCTTGATTATATGGAGAATAAGGCATCATCTCTTGGATTAAATATGCTTTTTCTGCTTACTACTCGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTGTATTCCTGAAAAGAGGAGGAAAATGATCAACCTGTCCCGTAATTCTAAGTATTATATGAAGAAGCTTCTACCAAACAGAAGTGGAATTATTGTTGGTAGAAAATATGCTACAAAATAG 1839 0.416 MAATSPIKPPMSLKSQGETWLSRATTCDQFFSYGTRVRTRRFCSCGCVSRLQRRRKEEFLLKGCWCDQASSNEDYGVTEEDKEFVKVLSEAQPYIAVHRDSVFVVLISAEIVAGPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLKERGSKPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNAYEVATACALAIGADKLISIIDGPILDESGRLIRFLPLQEADMLIRKRAAQSETAANYVKAIDEEVLNSLEHNHFNGTVQSPPNGKPSTEWNNVTFHNGVGFDNGNGLGSGEQGFAIGGQERLSRTNGYLSELAAVAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARITDISGIKQIIQPLEASGILIKRTDEELLKSLDNFVVEEREGQIIACGALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYMENKASSLGLNMLFLLTTRTADWFVRRGFSECSIDCIPEKRRKMINLSRNSKYYMKKLLPNRSGIIVGRKYATK* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0970 612 CDD AAK_NAGS-ABP 83 444 IPR033719 -
Lan18g0970 612 CDD NAT_SF 491 553 - -
Lan18g0970 612 Pfam Amino acid kinase family 116 328 IPR001048 -
Lan18g0970 612 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 74 606 - -
Lan18g0970 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 453 599 IPR016181 -
Lan18g0970 612 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 450 598 IPR000182 GO:0016407
Lan18g0970 612 SUPERFAMILY Carbamate kinase-like 81 320 IPR036393 -
Lan18g0970 612 SUPERFAMILY Carbamate kinase-like 397 446 IPR036393 -
Lan18g0970 612 Gene3D - 82 449 IPR036393 -
Lan18g0970 612 PANTHER AMINO-ACID ACETYLTRANSFERASE 74 606 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan18g0970 612 Gene3D - 450 596 - -
Lan18g0970 612 Pfam Acetyltransferase (GNAT) family 490 555 IPR000182 GO:0016407
Lan18g0970 612 Hamap Amino-acid acetyltransferase [argA]. 83 596 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan18g0970 612 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 405 596 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0970 Lan-Chr18 14847844 14855893 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan18g0970 AA_kinase 2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0970 K14682 - gmx:100777694 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0354 17 2560166 2567711 Lan18g0970 18 14847844 14855893 LSH
Lan18g0970 18 14847844 14855893 Lan6g0273 6 2094121 2099650 LSH