Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0965 ATGCTTTCTGCTCTTTCACCTAATGATCCTTTGCTTTCAAACCCATTCTCTGCGGCGTTTGACGGTGGTTACACGCCGTGGGACTGTCCTGAATTTTTCCTAGCCCCGAAACCAGTCACTAAACCAGTCACTTCAAGCACCGGTTCTGACGACCCTGATCAAACCCATGCCAAAGAAAAACCGGACTCAGACTACTCTAACCGCGGCGTAACCATCGTGGAGGAGCGTAAGCGAAGGCGAATGGTGTCGAACCGGGAATCGGCTCGGAGGTCACGTATGCGTAAACAGAGGCATCTAGAGAATTTACGGAACCAGTTGAACCTATTTAGGGTTGAAAACCGGGAACTGAACACACAGTTGCAGATACTGCTGAACCACTGTGACCGCGTCCGAACCGAAAACAATTGGCTCCGGTCCGAACGAACCCTGCTATGTCAAAAACTTTCCAACATAAGTCAGTTTATGGCTTTCGAATAA 477 0.4927 MLSALSPNDPLLSNPFSAAFDGGYTPWDCPEFFLAPKPVTKPVTSSTGSDDPDQTHAKEKPDSDYSNRGVTIVEERKRRRMVSNRESARRSRMRKQRHLENLRNQLNLFRVENRELNTQLQILLNHCDRVRTENNWLRSERTLLCQKLSNISQFMAFE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0965 158 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Lan18g0965 158 SUPERFAMILY Leucine zipper domain 76 127 IPR046347 GO:0003700|GO:0006355
Lan18g0965 158 Pfam bZIP transcription factor 76 134 IPR004827 GO:0003700|GO:0006355
Lan18g0965 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 137 IPR004827 GO:0003700|GO:0006355
Lan18g0965 158 CDD bZIP_plant_GBF1 77 128 IPR045314 GO:0003700|GO:0006355
Lan18g0965 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 36 157 - -
Lan18g0965 158 MobiDBLite consensus disorder prediction 38 72 - -
Lan18g0965 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Lan18g0965 158 PANTHER BZIP TRANSCRIPTION FACTOR 36 157 - -
Lan18g0965 158 Coils Coil 85 133 - -
Lan18g0965 158 MobiDBLite consensus disorder prediction 52 72 - -
Lan18g0965 158 Gene3D - 74 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0965 Lan-Chr18 14813316 14814230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0965 1 157 bZIP Transcription Factor Family AT3G49760 37.952 9.25e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan18g0965 bZIP_1 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0965 - - lang:109332688 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0359 17 2618279 2619096 Lan18g0965 18 14813316 14814230 LSH
Lan18g0965 18 14813316 14814230 Lan6g0285 6 2159769 2160686 LSH
Lan18g0965 18 14813316 14814230 Lan6g1465 6 21438643 21463106 PCT
Lan6g1465 6 21438643 21463106 Lan18g0965 18 14813316 14814230 PCT