Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0954 ATGCTACGTCTCTTATTATTCTCTCTCCTCTTCCTCCATTTTCACTACACACTTTCTCTCTCTTCTCCAATCTCAGAATACCGTGCTCTTCTCTCTCTTAAATCCTCATTCATCGATAACACTCCTTCTCTTCTCTCCTCCTGGAACACCACCACCGATCACTGTTCCTTCTCCGGCGTCACCTGCGACAACCGTCGACACGTCATTTCCATCAACCTCACCGGATTTTCCATCTCCGGTACTCTCTCTGGCGACTTCGCTCATCTTCCGTTTCTCTCCAACATCTCCCTCGCCGATAACAAGTTATCTGGTCCTATCCCTCCGCAACTCTCTTCTCTCTTCGGACTCCGATTTCTGAATCTTTCTAACAATGGTTTCAATGGCACATTCCCTTATGAGCTCTCTGTTCTCAAGAACCTTGAGGTTCTAGACCTCTACAATAACAACATGACCGGAGAGCTTCCTCTCGCCGTGACGGAGATGCCGAATCTCCGGCATTTGCATCTTGGAGGTAATTTTTTCTCCGGCCAGATCCCGCCGGAGTACGGACGGTGGCAGAATCTTAACTACCTTGCCGTTTCCGGCAACGAGCTCGACGGTAATATCCCACCGGAGATCGGAAACCTCACCAGTCTCCGGGAGCTCTACATCGGATACTTTAACACCTACGCAGGCGGAATTCCGCCGGAGATTGGTAACCTATCGGAGCTTGTGAGACTGGACGCCGCGTACTGTGGGCTCTCCGGTGAGATTCCGGTAGAGATCGGAAAGCTTCAAAAGTTAGACACTCTGTTTCTTCAAGTGAATGTGCTTTCAGGAACTCTAACACCAGAACTGGGAAACTTGAAGAGTTTGAAATCTATGGATTTATCTAACAACAAGCTTTGGGGTGAAATACCTGAGAGTTTCAAAGAGCTGAAGAACATAACACTGTTGAACTTGTTCAGAAACAAGCTTCATGGAGCGATTCCTGAGTTTATAGGAGAGTTACCATCTTTGGAAGTGGTGCAACTTTGGGAAAACAACTTCACTGGAAGAATTCCAAAAGGGTTAGGGCAAAATGGGAAACTTACAGTGGTAGATCTTTCTTCAAACAAGTTAACTGGGACTTTACCTCCAGATATGTGTAATGGGAATCGTCTTCAAACTTTGATAGCTTTGGCTAATTTTCTCTTTGGTCCTATTCCTGAAGCTCTTGGAAGGTGTAAATCTCTTAACAGGATTAGGATGGGTGATAATTTTCTCAACGGGTCAATTCCAAAAGGACTTTTAGGACTTCCAAATTTGACCCAGGTTGAGCTTCAGGATAATTATCTTACTGGTAATTTTCCTGAGGAACATTCAGTTTCTGTTAATCTTGGTCAGATTACTCTCTCAAATAATAAACTTTCAGGGCCTTTGCCACACACCATTGGCAACTTCTCTAGTATGCAAAAACTACTTCTTGATGGGAATAGGTTCTCTGGTCCAATCCCACCTGAGATTGGGAGATTACAACAGCTCTCAAAGATCGATGTTAGTAACAATATGCTTTCAGGTTTTATTGCCCCGGAAATCAGTCAATGCAAGCTGTTAACCTTCATTGATCTTAGCCGTAATGAGCTATCTGGTGAGATCCCGAAGGAGATCACCGGTATGAGGATATTAAACTATTTGAATCTTTCTAGAAATCATCTAGTTGGAACCATTCCTGGGCCAATATCCTCTATGCAAAGCTTAACTTCTGTTGATTTTTCATATAACAATCTATCTGGTTTGGTTCCTGGTACTGGTCAATTTAGCTACTTCAATTATACGTCCTTCCTTGGCAACCCTGACCTCTGTGGTCCGTATTTGGTTCCATGCAAGGATGGGGTTGGCAGTGGTGCTCACCAACGTCATGTCAAAGGTCCACTCTCGTCTTCTTTCAAGCTCCTATTGGTTATTGGGTTGCTTGTGTGCTCCATTGCATTTGCTGTTGCAGCGATACTTAAGGCTCGGTCGCTGAAGAAGGCCAGCAAGGCTCGTGCATGGAAATTAACAGCATTTCAACGTTTAGAATTCACTGTTGATGATGTTTTGGATTGTTTGAAGGATGATAACATAATAGGGAAAGGGGGTGCTGGCATTGTGTACAAAGGTGCAATGCCTAATGGAGATCATGTTGCTGTGAAAAGGCTTCCAGCAATGAGCAGAGGCTCTTCACATGATCATGGATTCAATGCTGAGATTCAGACATTGGGCCGAATTCGACACAGGCACATTGTTAGGTTATTGGGTTTCTGTTCAAACCATGAGACCAATCTTTTGGTCTATGAATACATGCCAAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGCCATTTGCATTGGGACACCAGGTATAATGTTGCTGTGGAGGCTGCTAAAGGACTTTGTTATTTACACCATGATTGTTCGCCGCTCATCCTCCACCGAGATGTAAAATCAAACAATATCCTTCTTGATTCCAACTATGAAGCTCACGTTGCTGATTTTGGGCTTGCCAAGTTCCTTCAAGATTCTGGAACATCTGAATGCATGTCTGCGATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACACTGAAAGTAGATGAGAAGAGTGATGTGTACAGCTTTGGTGTGGTTCTCTTAGAGCTTATAACGGGCAGGAAACCAGTTGGAGAATTTGGCGATGGCGTGGACATCGTGCAATGGGTCAGGAAAATGACAGACTCTAACAAGGAAGGAGTTCTAAAAGTTCTTGATGCTAGACTTCCCTCTGTTCCCCTTGATGAGGCCATGCATGTCTTCTATGTAGCCATGCTGTGTGTTGAAGAACAGGCAGTAGAGCGACCGACTATGCGTGAAGTTGTTCAAATTCTGACCGACTTTCCAAAGCCACCAGGCTCCAAACAAGGAGAGTTAACAATTACAGAGTCATCTTTATCATCATCAGACGCTTTAGAGTCTCCATCCTCAGCCTCTAAAGATAATCAACAACACCCACAAACCCCACTACCTGATCTTCTTAGCTCTTAA 3039 0.4429 MLRLLLFSLLFLHFHYTLSLSSPISEYRALLSLKSSFIDNTPSLLSSWNTTTDHCSFSGVTCDNRRHVISINLTGFSISGTLSGDFAHLPFLSNISLADNKLSGPIPPQLSSLFGLRFLNLSNNGFNGTFPYELSVLKNLEVLDLYNNNMTGELPLAVTEMPNLRHLHLGGNFFSGQIPPEYGRWQNLNYLAVSGNELDGNIPPEIGNLTSLRELYIGYFNTYAGGIPPEIGNLSELVRLDAAYCGLSGEIPVEIGKLQKLDTLFLQVNVLSGTLTPELGNLKSLKSMDLSNNKLWGEIPESFKELKNITLLNLFRNKLHGAIPEFIGELPSLEVVQLWENNFTGRIPKGLGQNGKLTVVDLSSNKLTGTLPPDMCNGNRLQTLIALANFLFGPIPEALGRCKSLNRIRMGDNFLNGSIPKGLLGLPNLTQVELQDNYLTGNFPEEHSVSVNLGQITLSNNKLSGPLPHTIGNFSSMQKLLLDGNRFSGPIPPEIGRLQQLSKIDVSNNMLSGFIAPEISQCKLLTFIDLSRNELSGEIPKEITGMRILNYLNLSRNHLVGTIPGPISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLVPCKDGVGSGAHQRHVKGPLSSSFKLLLVIGLLVCSIAFAVAAILKARSLKKASKARAWKLTAFQRLEFTVDDVLDCLKDDNIIGKGGAGIVYKGAMPNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYNVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDARLPSVPLDEAMHVFYVAMLCVEEQAVERPTMREVVQILTDFPKPPGSKQGELTITESSLSSSDALESPSSASKDNQQHPQTPLPDLLSS* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0954 1012 Gene3D Phosphorylase Kinase; domain 1 654 767 - -
Lan18g0954 1012 Gene3D Ribonuclease Inhibitor 222 374 IPR032675 -
Lan18g0954 1012 Pfam Protein tyrosine and serine/threonine kinase 693 961 IPR001245 GO:0004672|GO:0006468
Lan18g0954 1012 Gene3D Ribonuclease Inhibitor 133 221 IPR032675 -
Lan18g0954 1012 SUPERFAMILY L domain-like 354 615 - -
Lan18g0954 1012 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 1002 - -
Lan18g0954 1012 MobiDBLite consensus disorder prediction 973 1012 - -
Lan18g0954 1012 SUPERFAMILY L domain-like 47 344 - -
Lan18g0954 1012 Pfam Leucine Rich repeats (2 copies) 138 178 IPR025875 -
Lan18g0954 1012 Gene3D Ribonuclease Inhibitor 25 132 IPR032675 -
Lan18g0954 1012 Gene3D Transferase(Phosphotransferase) domain 1 768 974 - -
Lan18g0954 1012 MobiDBLite consensus disorder prediction 965 1012 - -
Lan18g0954 1012 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lan18g0954 1012 SMART serkin_6 690 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0954 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1002 - -
Lan18g0954 1012 SUPERFAMILY Protein kinase-like (PK-like) 684 961 IPR011009 -
Lan18g0954 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Lan18g0954 1012 ProSiteProfiles Protein kinase domain profile. 690 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0954 1012 SMART LRR_typ_2 161 185 IPR003591 -
Lan18g0954 1012 SMART LRR_typ_2 282 305 IPR003591 -
Lan18g0954 1012 SMART LRR_typ_2 137 160 IPR003591 -
Lan18g0954 1012 SMART LRR_typ_2 355 378 IPR003591 -
Lan18g0954 1012 SMART LRR_typ_2 570 593 IPR003591 -
Lan18g0954 1012 SMART LRR_typ_2 498 522 IPR003591 -
Lan18g0954 1012 SMART LRR_typ_2 330 354 IPR003591 -
Lan18g0954 1012 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Lan18g0954 1012 Gene3D Ribonuclease Inhibitor 375 616 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0954 Lan-Chr18 14734306 14738173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0954 13 991 Receptor kinase-like Gene Family AT5G65700 78.499 0.0 1560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan18g0954 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0954 - - gmx:547593 1709.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0954 18 14734306 14738173 Lan6g0917 6 8549378 8553434 PCT
Lan6g0917 6 8549378 8553434 Lan18g0954 18 14734306 14738173 PCT