Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0950 ATGGCTGGTTTAGATTTAGGTACAGCTTCACGTTTTATTCAAAATCTCCAAAGACCAGACTTCAACTTGCAACAACAACAGCAGCAACAACAACAACAAACCGAATCAGAGGAAGATGGAAACCATGGTGATCCATACGAAGATGGACCCAACCAAGGGCTCGAGCTCGGTTCCGGCGGCGACATGGTTAAGCGCCGCCCACGTGGTCGACCAGCTGGTTCCAAGAACAAACCCAAACCTCCTGTTATCATAACAAAGGAAAGTGCCAACACGCTCAGGGCTCATATTCTCGAAGTTGGAAATGGCTGCGACGTTTTCGACTGCGTCGCCACCTACGCACGGCGTAACCAGCGGGGGATCTGTATCCTCAGCGGCAGTGGCACCGTCACTAATGTCAGTTTGCGGCAGCCTGCCGCGGCTGGATCCGTCGTCACCCTTCACGGAAGGTTTGAGATATTGTCATTGTCCGGGTCTTTCCTTCCGCCGCCGGCTCCGCCGGGGGCGACGAGTCTGACTATATACCTCGCCGGAGGTCAGGGGCAAGTGGTGGGAGGGAGTGTGGTTGGAGAGTTGACCGCGGCTGGGCCTGTGATTGTGATTGCTGCTTCTTTCACCAACGTGGCTTATGAGCGGTTACCTTTGGATGAAGAAGAAAATCATCAATTACAGACACCTACACAAGGCGGTGGTCAAGGTTCTGGCGGTGGCGGCGGCGTCGGGAACAGCAACAACCCATTTCCGGACCCGTCTTCGGGGCTGCCGTTCTTTAATTTGCCGGTGAATATGCCAAATGTTCAGTTGCCACCAGTGGATGGTTGGGCGGGAAATTCAGCTTCACGTCCTTCCTTTTGA 852 0.5399 MAGLDLGTASRFIQNLQRPDFNLQQQQQQQQQQTESEEDGNHGDPYEDGPNQGLELGSGGDMVKRRPRGRPAGSKNKPKPPVIITKESANTLRAHILEVGNGCDVFDCVATYARRNQRGICILSGSGTVTNVSLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEENHQLQTPTQGGGQGSGGGGGVGNSNNPFPDPSSGLPFFNLPVNMPNVQLPPVDGWAGNSASRPSF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0950 283 MobiDBLite consensus disorder prediction 221 258 - -
Lan18g0950 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 222 - -
Lan18g0950 283 CDD DUF296 93 176 IPR005175 -
Lan18g0950 283 MobiDBLite consensus disorder prediction 15 83 - -
Lan18g0950 283 ProSiteProfiles PPC domain profile profile. 89 226 IPR005175 -
Lan18g0950 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 283 - -
Lan18g0950 283 MobiDBLite consensus disorder prediction 15 36 - -
Lan18g0950 283 Gene3D - 92 227 - -
Lan18g0950 283 MobiDBLite consensus disorder prediction 221 250 - -
Lan18g0950 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Lan18g0950 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 283 IPR014476 GO:0003680
Lan18g0950 283 PIRSF ESCAROLA 8 283 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0950 Lan-Chr18 14710116 14711559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0950 1 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.898 8.14e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0950 - - jre:108994023 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0370 17 2738336 2739683 Lan18g0950 18 14710116 14711559 LSH
Lan18g0950 18 14710116 14711559 Lan6g0301 6 2309490 2310744 LSH
Lan18g0950 18 14710116 14711559 Lan17g0993 17 14245770 14247344 PCT
Lan17g0993 17 14245770 14247344 Lan18g0950 18 14710116 14711559 PCT