Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0926 ATGAAACTTAATTTTAGGCACCAACTTGGACTTGTTTGTGTCATAATGATGTTCCCTGCTCTGTGTATATCTCAGGACTCTTTTACATGTTCTAGAGCAACATATTATGGTAGCCCATATTGCTATGGAAATCCAAGGGGTGCTTGTGGCTTTGGCGAAGAAGAAAATATAGTAAACTATGGCAATGTCGCAGGAGTGTCTTGGCTATGGAAGAATGGATCAGGTTGTGGTGCATGCTATCAGGTTAGGTGCAAAATACCACAATATTGTGATGACTATGGAGCATTGGTGGTGGTAACAGATTATGGTGTGGGAGACAGAACAGACTTCATCATGAGTCCAAGTGGCTATTCAAGCTTGGGAAAAAATGCAGATGCATCTTCAGAGCTTTTAAAATATGGTGTGGTGGATGTTGAATACAAAAGGGTTCCATGTGGATACAGTGGCTATAACCTCATAGTTAAGGTTCACCAGCATAGCAGAAATCCTCACTACTTAGCCATTCTCATTCTCTATGTTGGTGGAACATATGACATAACTTCTATTGAGTTGTGGCAGGAAGAGTGCCAAGAATGGAGACCAATGCGTAGGGCTTTTGGGGCAGTGTTTGACTCTGCTAACCTGTCAAAGAGTGATATCAAGCTGAGGTTCCAAGTGAGTGGTAGTGCAGGGTTGTATTGGGTAGAATCCAAGAATGTAATCCCTTGTGAATGGACACCAGGAGCTGTTTATGACACACAAATTCAGCTTCATTAA 756 0.4193 MKLNFRHQLGLVCVIMMFPALCISQDSFTCSRATYYGSPYCYGNPRGACGFGEEENIVNYGNVAGVSWLWKNGSGCGACYQVRCKIPQYCDDYGALVVVTDYGVGDRTDFIMSPSGYSSLGKNADASSELLKYGVVDVEYKRVPCGYSGYNLIVKVHQHSRNPHYLAILILYVGGTYDITSIELWQEECQEWRPMRRAFGAVFDSANLSKSDIKLRFQVSGSAGLYWVESKNVIPCEWTPGAVYDTQIQLH* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0926 251 Gene3D - 20 144 IPR036908 -
Lan18g0926 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Lan18g0926 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Lan18g0926 251 Gene3D - 145 247 IPR036749 -
Lan18g0926 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Lan18g0926 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Lan18g0926 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Lan18g0926 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Lan18g0926 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Lan18g0926 251 PANTHER EXPANSIN-B3 4 250 - -
Lan18g0926 251 SUPERFAMILY Barwin-like endoglucanases 13 149 IPR036908 -
Lan18g0926 251 Pfam Expansin C-terminal domain 154 235 IPR007117 -
Lan18g0926 251 SUPERFAMILY PHL pollen allergen 151 245 IPR036749 -
Lan18g0926 251 Pfam Lytic transglycolase 63 140 IPR009009 -
Lan18g0926 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0926 Lan-Chr18 14506619 14508794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0926 1 250 Expansin Gene Family AT4G17030 56.175 2.77e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0926 - - gmx:100802855 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0926 18 14506619 14508794 Lan17g0966 17 13576111 13579003 PCT
Lan17g0966 17 13576111 13579003 Lan18g0926 18 14506619 14508794 PCT