Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0924 ATGGGCAAGCAAGGTCCTTGTTATCACTGTGGAGTTACTAGCACACCACTTTGGCGTAATGGGCCACCAGAGAAGCCAGTACTATGTAATGCATGTGGATCTCGATGGAGGACTAAGGGAACACTTGCAAATTATATCCCTTTACATGCTCGGGCAGAAGGTGCCGATTACGAGGATCAAAGGGTTTCCAGGGTAAAGAGCATATCATTAAATAAGAATAAAGAAATGAAATCGCTTAAACGAAAGCTGAGCAATGATAATGTTGTATTTGGAGGGCTTGCTCCTGATTACAACCAGGGATTCCGAAAAGCTTTAGATGAAGATACAAGCAATCGATCAAGTTCAGGATCAGCTATCTCTAACTCAGAGAGCTGTGCTCAATTTGGTGGCATGGATGCTAGTGATTTGACAGGTCCTGCTCAGCCAGTGGTGTGGGATACTGTGGTGCCTTCAAAAAAGAGGACATGTGTGGGTCATCCAAAGCATTCTTCTGTTGAGAAGCTCACAAAAGATTTATGCACTATTCTTCAAGAACAGCAGTCTTGTTTTTCTGCATCTTCCGAAGGGGAGCTTCTTTTTGAAAGTGAAACACCAATGGTCTCAGTCGAGATAGGCCATGGAAGCATTCTCATCAGGCATCCTAGCTACATAGCTCGTGAAGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAACAAACAATGCACAATGAATGAGGCATATTCATATCCTGGTGCCGTTCTTATGCGTAATGATTCCAATAGTATCACCTTTTCATCTCATAGAGTTGAAAAGGTTGGGAGCACTGCTGGCCAGGGAATGCAGCAGGAGCAACTTAAAAGGGACAAGTCTCAGCTTGAAAGAGTACAAATCCTTGGAAATCATGATTCACCACTGAGCTTAATAGATTTAAATGATGTAGTAAACTATGAGGAGTTCTTGAAAAACTTGACGAAGGAAGAGCAGCAGCAACTACTTAAGTTTCTTCCTGTGGTCGATGCTGTTAAACTTCCTGATAGCCTCAAGTTCATGTTCGATAGCTCTCAATTCAAGGAGAACTTAACTTATTTTCAGCAGCTTCTTGCGGAAGGTGTCTTTGATATCACTTTGTCCGGGGCAAAACAAGAAGACTGCAAGACTTTGAAAAGGCAAGCACTGTCCAATCTGTCAAAGTCAAAATGGGTAGAACACTATTATTTTCTCAAGAAATGTAAATCCAGGACTGGAAAATCTGTTAATCTGGGGTCAAATGGTACACTATCAACTAATGTTGTAAATGTCAAGAGATCGCGTGACTACCGAAATCAAAACTTTCCAGAATTGAATACAACAATGAGGAGTCCCAAAAGGGTGATAGCAAATGCTGGCTGTGAGGGAAAGGAAGTTGTAGAAGATGGCTCTTACTTCAGTCCCAAAAGCCTATTTGCTTTGCCTCCCGATGCTAGTTCGCTCTTGCTGGATTCTTTAAATTTCGTTGACGAGAGTTCCGATCAGGATCTGCTGCTAGAGGTGCCATCTAATAATTCTTTTCCTCAGGCAGAGCTGCTGCCCCCAAATTTAAGCTTCGGTGCTCAAGCTAGCACCAGTAGTAGCTCAGTATACTCAAATCTTCTCCATCGTTAA 1623 0.4251 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYIPLHARAEGADYEDQRVSRVKSISLNKNKEMKSLKRKLSNDNVVFGGLAPDYNQGFRKALDEDTSNRSSSGSAISNSESCAQFGGMDASDLTGPAQPVVWDTVVPSKKRTCVGHPKHSSVEKLTKDLCTILQEQQSCFSASSEGELLFESETPMVSVEIGHGSILIRHPSYIAREEESEASSLSVDNKQCTMNEAYSYPGAVLMRNDSNSITFSSHRVEKVGSTAGQGMQQEQLKRDKSQLERVQILGNHDSPLSLIDLNDVVNYEEFLKNLTKEEQQQLLKFLPVVDAVKLPDSLKFMFDSSQFKENLTYFQQLLAEGVFDITLSGAKQEDCKTLKRQALSNLSKSKWVEHYYFLKKCKSRTGKSVNLGSNGTLSTNVVNVKRSRDYRNQNFPELNTTMRSPKRVIANAGCEGKEVVEDGSYFSPKSLFALPPDASSLLLDSLNFVDESSDQDLLLEVPSNNSFPQAELLPPNLSFGAQASTSSSSVYSNLLHR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0924 540 PANTHER OSJNBB0038F03.10 PROTEIN 1 539 IPR044589 -
Lan18g0924 540 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 539 - -
Lan18g0924 540 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 43 - -
Lan18g0924 540 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
Lan18g0924 540 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Lan18g0924 540 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Lan18g0924 540 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Lan18g0924 540 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Lan18g0924 540 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Lan18g0924 540 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 295 407 IPR044867 -
Lan18g0924 540 Pfam Asx homology domain 283 369 IPR028020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0924 Lan-Chr18 14487308 14493082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0924 1 516 C2C2-Gata Transcription Factor Family AT4G17570 53.119 1.29e-162 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan18g0924 ASXH 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0924 - - gmx:100803914 811.216