Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0922 ATGACTGCTTCTTCTGCGAATCAACTTATCTCTATTAGTCCTGATGAACTTAGGTTCCAATTTGAGCTGGACAAGCAAACATTTTGTGATCTTAAAGTTGCAAATAACACAGAGAGCTATGTTGCATTCAAGGTCAAAACCACTTCACCAAAGAAGTACTTTGTAAGACCAAACACTGGTGTTATACAGCCCTGGGACTCTTGTATCATCAGAGTCACTCTCCAAGCCCAACATGAATACCCTGCAGACATGCAATGCAAAGACAAGTTTCTCTTGCAGAGTACGATAATTAATTCAAATACCGATGTCGATGAGCTCCCACCAGATACTTTTAGTAAGGAAAGTGGAAATACAATAGAAGATTTGAAACTAAGAGTTGTATATATCTCTCCTAACTCACCCCAAGGATGCTCTGAAGATGATGTATTGAAGAACTCCTTACAAAAACTTGATGCCTCTTCTAGTGAGGCTTTACAGCACCTGAAGGAAGAAAGAGACGCTGCCGCCAGACAAACGCGACAACTGCAACAAGAACTGGACATGCTTAAAAGGCGAAGGAGCCGAAGCGATCCTGGGTTTTCCTTCATTTTTGCCATTTTTGTGGGTGTCATTGGAATTTTGCTTGGCTTTCTTTTGAAACTTATATTCTCTTCACCATCTGCAGAATGA 669 0.4081 MTASSANQLISISPDELRFQFELDKQTFCDLKVANNTESYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQHEYPADMQCKDKFLLQSTIINSNTDVDELPPDTFSKESGNTIEDLKLRVVYISPNSPQGCSEDDVLKNSLQKLDASSSEALQHLKEERDAAARQTRQLQQELDMLKRRRSRSDPGFSFIFAIFVGVIGILLGFLLKLIFSSPSAE* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0922 222 Pfam MSP (Major sperm protein) domain 10 111 IPR000535 -
Lan18g0922 222 Gene3D Immunoglobulins 2 133 IPR013783 -
Lan18g0922 222 SUPERFAMILY PapD-like 5 137 IPR008962 -
Lan18g0922 222 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 4 219 IPR016763 GO:0005789
Lan18g0922 222 Coils Coil 158 185 - -
Lan18g0922 222 PIRSF VAMP_assoc_prot 2 146 IPR016763 GO:0005789
Lan18g0922 222 PIRSF VAMP_assoc_prot 136 214 IPR016763 GO:0005789
Lan18g0922 222 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 4 219 - -
Lan18g0922 222 ProSiteProfiles Major sperm protein (MSP) domain profile. 9 129 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0922 Lan-Chr18 14472162 14476495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0922 - - aprc:113869624 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0407 17 3009276 3013589 Lan18g0922 18 14472162 14476495 LSH
Lan18g0922 18 14472162 14476495 Lan6g0325 6 2510506 2521632 LSH
Lan6g0982 6 9217518 9222201 Lan18g0922 18 14472162 14476495 PCT
Lan17g0941 17 13027992 13032315 Lan18g0922 18 14472162 14476495 PCT