Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0910 ATGGTGAAAATAGCTTTTGGTAGCTTTGATGATTCTTTTAGTGTTACATCCATCAAGGCTTATCTTGCTGAGTTTCATGCCACTCTCATTTTTGTGTTTGCTGGTGTTGGATCAGCCATTGCTTACAATGAGGTTACAAAAGATGCAGCTTTAGATCCTGCTGGGCTTGTAGCAGTAGCATTGGCCCATGCATTTGCACTATTTGTGGGTGTTTCCATTGCAGCAAACATCTCTGGTGGCCATTTGAACCCAGCTGTCACTTTTGGATTGGCTATTGGAGGCAACATCACTATCCTCACTGGTCTCTTCTACTGGATTGCCCAATTGCTTGGTTCTATTGTTGCATCTCTACTCCTCTCTTTTGTCACCTCTAAGAGCATTCCAACCCATGCAGTGGCTCCTGGAGTGAACGCCTTAGGAGGTGTTGTGTTCGAGATCATTATCACATTTGGATTAGTGTACACTGTGTATGCCACAGCAGTTGACCCTAAAAAGGGCTCATTGGGGACCATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCAAACATCTTAGCTGCCGGTCCATTCAGTGGCGGTTCAATGAACCCGGCTCGATCATTTGGTCCAGCTGTGGTTAGTGGTAACTTCGCTGAAAACTGGATCTATTGGGTTGGCCCATTGATTGGTGGAGGCTTAGCTGGGTTGATCTATGGTGGCATCTTCATTGGTTCTTATGCTGCTGTCCCTGCCACTGAAACCTATCCTTAA 750 0.4613 MVKIAFGSFDDSFSVTSIKAYLAEFHATLIFVFAGVGSAIAYNEVTKDAALDPAGLVAVALAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVASLLLSFVTSKSIPTHAVAPGVNALGGVVFEIIITFGLVYTVYATAVDPKKGSLGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFAENWIYWVGPLIGGGLAGLIYGGIFIGSYAAVPATETYP* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0910 249 SUPERFAMILY Aquaporin-like 14 238 IPR023271 -
Lan18g0910 249 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Lan18g0910 249 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 TIGRFAM MIP: MIP family channel proteins 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 PANTHER AQUAPORIN-8 1 249 IPR034294 -
Lan18g0910 249 PANTHER AQUAPORIN TIP2-2-RELATED 1 249 - -
Lan18g0910 249 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan18g0910 249 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0910 Lan-Chr18 14376469 14378771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0910 1 246 Major Intrinsic Protein MIP AT5G47450 78.138 8.81e-134 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0910 K09873 - gmx:100527333 408.297