Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0904 ATGAGCACCGCAGAACTTCTCAGCATCGAACCTCACGAACTTAAGTTCGTCCTTGAGCTGCAGAAGCAGATCTCGTCTTCTCTTCAATTGTCAAATAACACCGACAGTTATGTAGCTTTCAAGGTGAAAACAACGAATCCCAAGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCTCGATCTACATGTGATGTTATAGTTACAATGCAAGCACAAAATGAAGCTCCACCTGATTTGGTATGCAAGGATAAGTTTCTTCTGCAAAGCATAAAAACACATGATGGAGCTACTACAAATGATATCTCTGCAGAAATGTTCAACAAGGAATTAGGGCATGTGGTTGAGGAATCCAAGTTGAGAGTGGTTTATGTTGCTCCACCTCAACCACCATCTCCAGTCCGAGAAGGTTCTGAGGAAGGATCATCGCCAAGAGCTTCAGTTTCAGAAAATGGAAATGCCAATGGCGCTGACTCCACAACAGCAAAAGAGCTTATCTCAAGGCTGACTGAAGAAAAGAATAACGCAATTCAACAAAATAACATGCTCCGTCAGGAACTGGATCTGCTGAGACGTGAAAGCAACAAAAACCGTGGGGGTGTCTCAATGATCTTTGTTACATTAATTGGTTTACTTGGCATAATTATGGGGTATCTCATGAGGAAGACCTGA 675 0.4237 MSTAELLSIEPHELKFVLELQKQISSSLQLSNNTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQNEAPPDLVCKDKFLLQSIKTHDGATTNDISAEMFNKELGHVVEESKLRVVYVAPPQPPSPVREGSEEGSSPRASVSENGNANGADSTTAKELISRLTEEKNNAIQQNNMLRQELDLLRRESNKNRGGVSMIFVTLIGLLGIIMGYLMRKT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0904 224 Coils Coil 167 194 - -
Lan18g0904 224 Gene3D Immunoglobulins 1 130 IPR013783 -
Lan18g0904 224 MobiDBLite consensus disorder prediction 127 162 - -
Lan18g0904 224 MobiDBLite consensus disorder prediction 143 162 - -
Lan18g0904 224 PIRSF VAMP_assoc_prot 1 223 IPR016763 GO:0005789
Lan18g0904 224 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Lan18g0904 224 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lan18g0904 224 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lan18g0904 224 PANTHER VESICLE-ASSOCIATED PROTEIN 1-1-LIKE 1 223 - -
Lan18g0904 224 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 223 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0904 Lan-Chr18 14314362 14317893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0904 - - lang:109333499 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0904 18 14314362 14317893 Lan18g0904 18 14314362 14317893 ECH
Lan18g0904 18 14314362 14317893 Lan6g0348 6 2697184 2701079 LSH
Lan18g0904 18 14314362 14317893 Lan6g0982 6 9217518 9222201 PCT
Lan18g0904 18 14314362 14317893 Lan17g0941 17 13027992 13032315 PCT