Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0887 ATGGATCCAATTTCAGCGCATGGACACTCTCTTCCCCCTCCTTTCCACACAAGAGATTTTCATCTTCAGCAGCAGCAACAACAACAATTCCACGCTTTACATCAAAACACAGAAGACTCTCAAAGCGAAAGCAGCGGTGGATTAAACCTCAAAAGGGAGCGCGACGAAAACAACAACAGTGAAGGGAAAGAACTCGGTGGTGAAACTGAGATGTCAAGAAGACCTAGAGGAAGACCAGCTGGATCCAAAAACAAACCAAAGCCACCCATCATCATCACACGTGACAGTGCTAATGCCCTAAAAACGCACGTGATGGAAGTCGCCGACGGTTGCGACATCATAGAAAGTGTGTCCAACTTCGCTAGGCGTCGCCAGAGAGGTGTTTGCATCATGTCCGGCACTGGAACAGTTACTAATGTAACTCTTCGGCAACCAGCTTCTTCTGGTGCTGTTGTCACCCTTCATGGAAGGTTCGAGATCTTGTCCCTCTCTGGATCCTTCCTCCCACCACCTGCTCCGCCCGCCGCATCGGGTTTGACCATATATTTGGCGGGCGGACAAGGACAGGTTGTGGGAGGAAGTGTGGTGGGGACACTTTTAGCTTCGGGTCCGGTGGTGATTATCTCGGCTTCATTTAGTAACGCTGCTTATGAGAGGCTACCTTTGGAAGAAGATGATCCTTCTTCGCTTCCACTTCAAGGTGGTGGTGGCTCGATTGATTCCCCGAGTGCTGGTGGTAGCGGTGGTGGAGTTGGTGGTCAACAACATCAGAATCAGCTTTTAGGAGATGCAACTGCTCCACTTTTTCATGGTTTGCCTCCAAATCTTCTTAATTCTGTTCAGATGCCTTCAGAAGCATTCTGGAATACTGGTCGCTCTCCATACTGA 888 0.4944 MDPISAHGHSLPPPFHTRDFHLQQQQQQQFHALHQNTEDSQSESSGGLNLKRERDENNNSEGKELGGETEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIIESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLLASGPVVIISASFSNAAYERLPLEEDDPSSLPLQGGGGSIDSPSAGGSGGGVGGQQHQNQLLGDATAPLFHGLPPNLLNSVQMPSEAFWNTGRSPY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0887 295 CDD DUF296 101 168 IPR005175 -
Lan18g0887 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 295 IPR014476 GO:0003680
Lan18g0887 295 MobiDBLite consensus disorder prediction 224 266 - -
Lan18g0887 295 MobiDBLite consensus disorder prediction 48 77 - -
Lan18g0887 295 ProSiteProfiles PPC domain profile profile. 97 233 IPR005175 -
Lan18g0887 295 Gene3D - 100 233 - -
Lan18g0887 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 228 - -
Lan18g0887 295 MobiDBLite consensus disorder prediction 19 47 - -
Lan18g0887 295 PIRSF ESCAROLA 16 294 IPR014476 GO:0003680
Lan18g0887 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 295 - -
Lan18g0887 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Lan18g0887 295 MobiDBLite consensus disorder prediction 248 262 - -
Lan18g0887 295 MobiDBLite consensus disorder prediction 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0887 Lan-Chr18 14175424 14177042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0887 1 295 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.624 6.28e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0887 - - lang:109348923 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0887 18 14175424 14177042 Lan18g0887 18 14175424 14177042 ECH