Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0883 ATGAAGAAACTCAATCAAATTAATCTCTCTCATGCTCTATTGTGTGTCATTCTTTGTTTCCTTTTATCTCTCACTGTCTCATCAGCAGAAACTGAGAAGGAGATTTTGCTTCAATTCAAGGGTAACATCACAGATGATCCCTTCAACAGTTTGAGTTCATGGATTTCAAGTGGAAACCCTTGCAATTACAGCGGTATTTCGTGTAATTTGGAAGGTTTTGTAGAAAGAATTGTTCTTTGGAATACTAATTTGGCTGGAGTGTTGTCACCGGCACTGTCAGGGTTGAAGAGATTGAGGATATTGACATTGTTCGGAAATCGCTTCTCTGGCAATTTCCCAGCAGAATATGCTGATCTTCACACATTGTGGAAGATCAATGTGAGCTCCAATTTGTTATCTGGTTCAATCCCAGAGTTCATAGGTGATTTACCCAACATTCGCTTTCTAGATTTATCAAAGAATGGCTTCACCGGGGAGATACCTTCGGCTTTGTTTAGGTACTGTTACAAAACCAAGTTTGTTTCTCTTTCTCATAACAATCTTGTTGGTCCAATTCCTGAGTCATTAGTGAATTGCTCTAACCTTGAAGGATTTGACTTTTCCTCCAACAAATTGAGCGGGGTTGTCCCTTCGCGACTTTGTGATATTCCAAGGTTATCATATTTATCACTGAGAAACAATGCCTTATCAGGGAGTGTGCAAGAGCACATTTCTGCATGCCAAAGCTTGAAACTTTTGGATTTGGGTAGTAATAGATTCACTGGTTTTGCCCCATTCAGCATCCTTGTAATGCAAAATATAACCTATTTCAATATATCCTATAATGTGTTTACGGGGCAGATTCCTGATATCACTGATTGTAGTGAGAGTTTGGAAATCTTTGATGCTTCAGGGAATTATTTGGATGGGGTGATTCCCTCCAGCATAACAAGATGCAAGAGCTTAAAGGTCTTGTACTTGGAGTTGAATAGGCTGAAAGGGAGTATCCCGGTGGATATTCAGAACTTGCAAAGACTATTAGTTATCAAATTGGGGAATAATTCAATAAGTGGAACGATTCCCCGGGGTTTTGGAAACATTGAGCTGCTTGAAGTTCTGGATTTGCACAATCTAAACCTTGTTGGTGAAATTCCTGTCGATATAAACAATTGCAGGTTTCTTCTTGCTCTGGATGTTTCTGGTAATAGCTTAGAGGGTGAGATTCCTCAGACCCTTTACAACCTGACAAACCTAGAATCCCTTGACCTGCATCAAAATCAGTTCAACGGGAGCATCCCACCGAGCCTAGGAAACCTTTCAAGGATCCAATTCCTAGATCTGTCACATAATTCAATTTCTGGATCAATTCCTCCCACCCTTGGAAATTTAAGGAGCTTAACAAATTTTAATCTCTCATTCAATAATCTTTCTGGCATCATTCCTCAAATTGAAACCATACAGCATTTTGGTCCATCTGCATTTTCCAATAATCCTTTACTCTGTGGCGCACCTTTGGACACTGCTTGTTCAGCAAACGGAAATGGATCACCTTCAGCTCCTAGGACAGGGAAGACAAAAGTTTTAGGTGTCTCTGTGCTTGTTGCAATTGTTGCTGCAGCTGTAATTCTTACAGGAGTTTGTTTGGTGACCATCATGAGTATCAGGGCTCGTAGTCAGAAAAATGATGATCAGATTATGATTGTCGAGAGCAGCACAACTGTTGGATCATCAGAATCAAATGTTATAATTGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCGGGTACCAAAGCGTTGCTTGACAAAGAGTCTATTATAGGCGGTGGATCAATTGGTACAGTCTACAGAACTGATTTTGAAGGCGGCATCTCAATCGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATGAGAAACCAGGAAGAATTTGAGCATGAAATCGGGCGACTAGGCAACATTCAACACCCTAATTTAGTTGGTTTTCAAGGTTACTATTGGTCCTCCTCTATGCAGTTGATTATATCCGAATTTGTCCCAAATGGGAATCTCTTTGACAATCTTCATGGGATCGGCTATCCTGGAACTAGCACTAGCAGTGGCAATAGGGAATTAAATTGGTCTAGAAGGTTCCGAGTTGCACTTGGAACTGCAAGAGCCATTGCCTACCTCCACCATGATTGTAGACCTCCGATTCTTCATCTCAACATTAAATCCTCTAACATACTCATAGATGACAAGTATGAAGCTAAGTTGTCTGATTTTGGTTTAGGAAAGTTACTTCCCATTTTGGACAATTATGGTTTGACCAAGTCTCACAATTCTGTTGGGTATGTTGCACCAGAGTTGGCACAAAGCCTGAGGCAAAGTGAGAAATGTGATGTTTACAGTTTTGGGGTCATTCTTTTGGAGCTAGTTACCGGGAGAAAGCCTGTAGAAAGTCCATCATCAAGTGAAGTGGTGGTGTTGTGTGAATATGTAAGAGGTTTGTTGGAGACTGGCTCGGCTTCAAATTGCTTTGATAGAAATCTACTCGGATTTTCTGAGAATGAATTAATTCAGGTTATGAAATTGGGGCTAATTTGTACTTCAGAGGATCCCGTAAGGAGACCGAGTATGGCTGAGGTGGTGCAGGTCCTTGAGTCCATTAGAAATGGATCGGAATCACATTAA 2670 0.4075 MKKLNQINLSHALLCVILCFLLSLTVSSAETEKEILLQFKGNITDDPFNSLSSWISSGNPCNYSGISCNLEGFVERIVLWNTNLAGVLSPALSGLKRLRILTLFGNRFSGNFPAEYADLHTLWKINVSSNLLSGSIPEFIGDLPNIRFLDLSKNGFTGEIPSALFRYCYKTKFVSLSHNNLVGPIPESLVNCSNLEGFDFSSNKLSGVVPSRLCDIPRLSYLSLRNNALSGSVQEHISACQSLKLLDLGSNRFTGFAPFSILVMQNITYFNISYNVFTGQIPDITDCSESLEIFDASGNYLDGVIPSSITRCKSLKVLYLELNRLKGSIPVDIQNLQRLLVIKLGNNSISGTIPRGFGNIELLEVLDLHNLNLVGEIPVDINNCRFLLALDVSGNSLEGEIPQTLYNLTNLESLDLHQNQFNGSIPPSLGNLSRIQFLDLSHNSISGSIPPTLGNLRSLTNFNLSFNNLSGIIPQIETIQHFGPSAFSNNPLLCGAPLDTACSANGNGSPSAPRTGKTKVLGVSVLVAIVAAAVILTGVCLVTIMSIRARSQKNDDQIMIVESSTTVGSSESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESIIGGGSIGTVYRTDFEGGISIAVKKLETLGRMRNQEEFEHEIGRLGNIQHPNLVGFQGYYWSSSMQLIISEFVPNGNLFDNLHGIGYPGTSTSSGNRELNWSRRFRVALGTARAIAYLHHDCRPPILHLNIKSSNILIDDKYEAKLSDFGLGKLLPILDNYGLTKSHNSVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPSSSEVVVLCEYVRGLLETGSASNCFDRNLLGFSENELIQVMKLGLICTSEDPVRRPSMAEVVQVLESIRNGSESH* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0883 889 SUPERFAMILY L domain-like 74 162 - -
Lan18g0883 889 SMART LRR_typ_2 336 359 IPR003591 -
Lan18g0883 889 SMART LRR_typ_2 456 479 IPR003591 -
Lan18g0883 889 SMART LRR_typ_2 143 167 IPR003591 -
Lan18g0883 889 SMART LRR_typ_2 408 432 IPR003591 -
Lan18g0883 889 PANTHER UNNAMED PRODUCT 10 888 - -
Lan18g0883 889 Gene3D Phosphorylase Kinase; domain 1 565 677 - -
Lan18g0883 889 SUPERFAMILY Protein kinase-like (PK-like) 602 880 IPR011009 -
Lan18g0883 889 Gene3D Ribonuclease Inhibitor 171 505 IPR032675 -
Lan18g0883 889 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lan18g0883 889 PANTHER - 10 888 - -
Lan18g0883 889 ProSiteProfiles Protein kinase domain profile. 601 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0883 889 CDD STKc_IRAK 607 882 - -
Lan18g0883 889 SUPERFAMILY L domain-like 166 497 - -
Lan18g0883 889 Gene3D Ribonuclease Inhibitor 28 170 IPR032675 -
Lan18g0883 889 Pfam Protein kinase domain 603 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0883 889 Gene3D Transferase(Phosphotransferase) domain 1 678 889 - -
Lan18g0883 889 Pfam Leucine rich repeat 174 229 IPR001611 GO:0005515
Lan18g0883 889 Pfam Leucine rich repeat 390 445 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0883 Lan-Chr18 14137052 14140991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0883 13 888 Receptor kinase-like Gene Family AT1G62950 64.326 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lan18g0883 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0883 - - mtr:MTR_5g011410 1402.11