Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0869 ATGGAAGGCTTATTACACTTTTTTGAGTTCAATCAAGGGAGGATGACCAAGAAAGTCCATTCTCACAAGAAACATCATGGTGGCATGGATGCTCCTCGAAATAGCCTTGATTTGCAAGTAGAAACATCTCATAATCACTGTTCACGAGGACAATTACCATACTGTTATCAAGTAGAAGACTGGTCAGAGAATAATCGTTTCTCAAATGTGGCTTCAATGAAAAAACTAATCAACGAAGAACTATCCAAAGGATCAAGCACTAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATATGATGCCACTGGACACTAAATCTGTTGTTCCATCAGAAAGAATAAGTGAAAATTCGGGGAAGAAACATTCAAGGAAGGGAATGAATGGAAATGGTTCAGTTAGTTGGGATTCCTCCAACTTCAATTATTGTAACCAAATGGAATTAGACTCATTTTATGGAGACATAGATGATGATGGATGGAGCCAGAGTTTCGGAGAAGCAAGGCCACGAGAACATCCTCAGGAAGAGGAACTCCAGAAATTTAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTGTAGAGTGTTCAAAGGTTGCTGATATTGGTAGTGCGCCTAGACGATTGCTTGCTCATGAGAACCTGAACAATGAAAAGGTGGCACATAATGCAAGTTCGCAGAGAGCAGCAAGAGAGAAACTTGCAGAATACGGTGGTGATATGGAGTTATTCCCAACTTTGCCAAAGCAAGCCTTTCCTTCGAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTGCTTAATGATGAAATCTAAAAACAGATTAGATAGGTCTTCTTCTCCTACTCGGATAGTTATCTTGAAGCCCGGTCTTGATAGCATTTGCAACCATGACGGCAATTGGAGCAGTTCTTCAAGCAGTTTACAAGGGAGGAATAGTATACAGGATTTTCTTGAGGAAGTGAAAGAGCGCTTGAAATGTGAACTACAAGGTACAACTGTCAAAAAAGGTTCAGTGGTTCGAGGAAGTGGAATTGAGACACCTTACACAGAAAAACCATGTGATCCTAAACTAATAGCTCGCCATATAGTAAAACAGGCGACTAGAGACGCTGAACCAAATTTACCCCGCTCAGAATCAGCAAGATCATACACAAGTGAAATGCAGTTCAATGAACCAAGTTCCCCTGAGTTTATCAATAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGTGAAAAGTGAAACACATGTTGATATTTCTGAGGTGAATTTTAGAAACTCAAGATTACATGCATTAAACGATCATAGAGTTAGAATAAAGCAAGGAGGAAATATTATCAAGTGTGCAAATGAGATGAACCACTCAAAAGAGGAAAAAGAAATACAAATAGGATCTTTCAGGCATGAACCAGAACCAGATGCCAATGTATTGTTCCACAACCACAGGGAGTTGTCACCTAGGAACCTTGTAAGGTCCCTGTCTGCTCCTGTATCAGGATCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACCGGTGCTCAAATTCGGAGGAAGGTTGAAGCTGTGGAAAATAAATCTGTTGATGTTAAAAAACAGAGAAAAGATAGATTTAATATTAAAGAAAAAGTCTCCAATTTTAGATATGGTCTTGCTCTAAGAAGGAAGCTTTTTGGAAAAAGGAATCAATCAATAGTAGAATCACATGCCAATGAATATGTTTCAATGGTAAGAGATGTCACAAGTGGACCAACAGTTTTCATGAACCATGGTGATAGGCATGAGAACTTCACTGAGGTGCCTCCTAGTCCGGCATCTGTGTGCAGCAGTGTTCATGAAGAACATTGGAGGCAGATTGAATATTTAAGTCCAATATCAACTCCAGATGTGTCTTCAAGAGATGATAACATTGTGCCCCATGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAAGCAACTCAGTCAACTTGAGTCTAATAGTACCGAAGAATTCACGGCGAAACAAAAGGCTAAGCCTATTGAGTCTGAATTAGTTAAAATAGAGGATCCAGCAGAATCTTACACAAGAGATCTACTTGTTGCCTCCGGTCTCTACTTCGGTTCATGGGATAAATCTTTATTAAGAGGAGACACATTTGCCAAGCCTATTGGAAACTCAGTTTTTGAAGAAGTGGAAGCATCTCATAAGAAATTGGCCAAGGACAGTAAGGATAGTTCTTTAAAGGATCAGAATGAGAAAATGTTAGACCACAAAGTTTTACATGATTTGTTAAATGAGGCACTTTCAGTAGTTCTTGGACCACCTTTGACATGGTCTAGATTCAGAAGGAAAATATGCAACTCTTCAATGATGCTACCACCATGTGGAAAGGAACTTTTGAACTTAGTGTGGGAAATTATCAGAGTTTCACTACATCATCCACTAGACATATGTACTTATTCACTTGATAGTTTGGTGGGTCAGTACTTGGAGTCTATCCCTTGGTCTGGATTAATATATGATGAGATTAATACATTGGGAAGAGATATAGAATGTTTAATAACTCATGATCTAGTTGAAGAACTCACAAGGGATATACTCTAA 2625 0.3943 MEGLLHFFEFNQGRMTKKVHSHKKHHGGMDAPRNSLDLQVETSHNHCSRGQLPYCYQVEDWSENNRFSNVASMKKLINEELSKGSSTRQNAPSLVARLMGIDMMPLDTKSVVPSERISENSGKKHSRKGMNGNGSVSWDSSNFNYCNQMELDSFYGDIDDDGWSQSFGEARPREHPQEEELQKFKKEFEAYQAARFVECSKVADIGSAPRRLLAHENLNNEKVAHNASSQRAAREKLAEYGGDMELFPTLPKQAFPSRSRTLSRDFEECLMMKSKNRLDRSSSPTRIVILKPGLDSICNHDGNWSSSSSSLQGRNSIQDFLEEVKERLKCELQGTTVKKGSVVRGSGIETPYTEKPCDPKLIARHIVKQATRDAEPNLPRSESARSYTSEMQFNEPSSPEFINRDTRRFLSERLRNVVKSETHVDISEVNFRNSRLHALNDHRVRIKQGGNIIKCANEMNHSKEEKEIQIGSFRHEPEPDANVLFHNHRELSPRNLVRSLSAPVSGSGTSFGKLLLEDRHILTGAQIRRKVEAVENKSVDVKKQRKDRFNIKEKVSNFRYGLALRRKLFGKRNQSIVESHANEYVSMVRDVTSGPTVFMNHGDRHENFTEVPPSPASVCSSVHEEHWRQIEYLSPISTPDVSSRDDNIVPHVFRDISSGLNELRKQLSQLESNSTEEFTAKQKAKPIESELVKIEDPAESYTRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEASHKKLAKDSKDSSLKDQNEKMLDHKVLHDLLNEALSVVLGPPLTWSRFRRKICNSSMMLPPCGKELLNLVWEIIRVSLHHPLDICTYSLDSLVGQYLESIPWSGLIYDEINTLGRDIECLITHDLVEELTRDIL* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0869 874 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 873 - -
Lan18g0869 874 Pfam DUF761-associated sequence motif 88 105 IPR032795 -
Lan18g0869 874 MobiDBLite consensus disorder prediction 111 134 - -
Lan18g0869 874 MobiDBLite consensus disorder prediction 381 400 - -
Lan18g0869 874 Coils Coil 653 673 - -
Lan18g0869 874 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 873 - -
Lan18g0869 874 MobiDBLite consensus disorder prediction 373 400 - -
Lan18g0869 874 Pfam Domain of unknown function (DUF4378) 700 868 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0869 Lan-Chr18 14050443 14055757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0869 73 873 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.618 1.24e-156 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0869 - - gmx:100779720 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0869 18 14050443 14055757 Lan6g0418 6 3331998 3337213 LSH