Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan18g0863 | ATGAGTAGTGGTGAGTTTAGCATGGAGGATCAGAATGGTGATACATTGGGAAGCTTAAATCATAATATTGGTAAACCTCCTAGAGATCACTCATCTATGCGCCATTGCAGCAGTTCTTCATGGCTTCCAGAATCAGAACCAGATATTAAGATTATAGGTTTGAAATCCACCAGTGAAGAGAAATCAGAGTTTTCACCTATATTGAGGTCTGGGAGCTGTTCTGAGAAAGGACCAAAGCAATACATGGAAGATGAATTCATCTGTGTTGATATTCTCTGTGAACATGTTGGTCCAGGAACAGAAATTCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGGCATGGTGGTATTGATGCGGCATCATTTGCCAAAAAGAACATCCTAAATTTTTTAATTGAAGACTCTCAGTTCCCCACAGGCATTAAGAAAGCTGTTAAGAATGCATTTGTGAAGGTTGATCATGCAATTAAAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACTGCTCTCATAGCCCTCTTGTTGGGAAGGGACATGCTAATTGCCAATGTAGGAGATTCTCGTGCAGTATTAGGCAAAAGGGGCAGAGCTATTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCAGAAAGACTAAGAATTGAGAAACTAGGTGGTGTGATCTATGATGGATACCTCAATGGCCAACTATCGGTAGCTCGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAGGGTTCTAAAAGTCCTTTAAGCTCGGATCCGGACCTAGAAGAGATTGTTCTGACAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAGTGCGCTGTAACAATGGTGAGGAGGGAACTCATGCAGCATAATGATCCTACAACATGTGCAAAAGCACTTGTGACCGAGGCGCTTCAACGCAACACATGTGACAACCTAACAGTTGTCGTAGTTTGTTTCTCCAAAGATCCACCTCCCAAGATTGAAATTCCGAGATCACATAGGAGGAGGAGTATTTCAGCTGAAGGCATTGATCTTCTCAAAGGTGTCTTAAATGGTAGATGA | 1092 | 0.4185 | MSSGEFSMEDQNGDTLGSLNHNIGKPPRDHSSMRHCSSSSWLPESEPDIKIIGLKSTSEEKSEFSPILRSGSCSEKGPKQYMEDEFICVDILCEHVGPGTEIPSPAAFYGVFDGHGGIDAASFAKKNILNFLIEDSQFPTGIKKAVKNAFVKVDHAIKDASALDSSSGTTALIALLLGRDMLIANVGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSDPDLEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTTCAKALVTEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGIDLLKGVLNGR* | 364 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan18g0863 | 363 | PANTHER | PROTEIN PHOSPHATASE 2C | 11 | 351 | IPR015655 | GO:0004722|GO:0006470 | |
Lan18g0863 | 363 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Lan18g0863 | 363 | SUPERFAMILY | PP2C-like | 62 | 330 | IPR036457 | - | |
Lan18g0863 | 363 | SMART | PP2C_4 | 59 | 327 | IPR001932 | - | |
Lan18g0863 | 363 | ProSitePatterns | PPM-type phosphatase domain signature. | 108 | 116 | IPR000222 | GO:0043169 | |
Lan18g0863 | 363 | Pfam | Protein phosphatase 2C | 70 | 321 | IPR001932 | - | |
Lan18g0863 | 363 | Gene3D | - | 53 | 333 | IPR036457 | - | |
Lan18g0863 | 363 | PANTHER | PROTEIN PHOSPHATASE 2C 47-RELATED | 11 | 351 | - | - | |
Lan18g0863 | 363 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Lan18g0863 | 363 | ProSiteProfiles | PPM-type phosphatase domain profile. | 69 | 329 | IPR001932 | - | |
Lan18g0863 | 363 | CDD | PP2Cc | 69 | 329 | IPR001932 | - | |
Lan18g0863 | 363 | SMART | PP2C_SIG_2 | 97 | 329 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan18g0863 | Lan-Chr18 | 14009606 | 14016502 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan18g0863 | 52 | 361 | PP2C-type Phosphatase Gene Family | AT3G51470 | 77.097 | 2.19e-178 | 496 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan18g0863 | K14803 | - | gmx:100781874 | 588.956 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan17g0454 | 17 | 3445370 | 3448732 | Lan18g0863 | 18 | 14009606 | 14016502 | LSH | |
Lan18g0863 | 18 | 14009606 | 14016502 | Lan6g0411 | 6 | 3296237 | 3299765 | LSH |