Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0863 ATGAGTAGTGGTGAGTTTAGCATGGAGGATCAGAATGGTGATACATTGGGAAGCTTAAATCATAATATTGGTAAACCTCCTAGAGATCACTCATCTATGCGCCATTGCAGCAGTTCTTCATGGCTTCCAGAATCAGAACCAGATATTAAGATTATAGGTTTGAAATCCACCAGTGAAGAGAAATCAGAGTTTTCACCTATATTGAGGTCTGGGAGCTGTTCTGAGAAAGGACCAAAGCAATACATGGAAGATGAATTCATCTGTGTTGATATTCTCTGTGAACATGTTGGTCCAGGAACAGAAATTCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGGCATGGTGGTATTGATGCGGCATCATTTGCCAAAAAGAACATCCTAAATTTTTTAATTGAAGACTCTCAGTTCCCCACAGGCATTAAGAAAGCTGTTAAGAATGCATTTGTGAAGGTTGATCATGCAATTAAAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACTGCTCTCATAGCCCTCTTGTTGGGAAGGGACATGCTAATTGCCAATGTAGGAGATTCTCGTGCAGTATTAGGCAAAAGGGGCAGAGCTATTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCAGAAAGACTAAGAATTGAGAAACTAGGTGGTGTGATCTATGATGGATACCTCAATGGCCAACTATCGGTAGCTCGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAGGGTTCTAAAAGTCCTTTAAGCTCGGATCCGGACCTAGAAGAGATTGTTCTGACAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAGTGCGCTGTAACAATGGTGAGGAGGGAACTCATGCAGCATAATGATCCTACAACATGTGCAAAAGCACTTGTGACCGAGGCGCTTCAACGCAACACATGTGACAACCTAACAGTTGTCGTAGTTTGTTTCTCCAAAGATCCACCTCCCAAGATTGAAATTCCGAGATCACATAGGAGGAGGAGTATTTCAGCTGAAGGCATTGATCTTCTCAAAGGTGTCTTAAATGGTAGATGA 1092 0.4185 MSSGEFSMEDQNGDTLGSLNHNIGKPPRDHSSMRHCSSSSWLPESEPDIKIIGLKSTSEEKSEFSPILRSGSCSEKGPKQYMEDEFICVDILCEHVGPGTEIPSPAAFYGVFDGHGGIDAASFAKKNILNFLIEDSQFPTGIKKAVKNAFVKVDHAIKDASALDSSSGTTALIALLLGRDMLIANVGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSDPDLEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTTCAKALVTEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGIDLLKGVLNGR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0863 363 PANTHER PROTEIN PHOSPHATASE 2C 11 351 IPR015655 GO:0004722|GO:0006470
Lan18g0863 363 MobiDBLite consensus disorder prediction 1 19 - -
Lan18g0863 363 SUPERFAMILY PP2C-like 62 330 IPR036457 -
Lan18g0863 363 SMART PP2C_4 59 327 IPR001932 -
Lan18g0863 363 ProSitePatterns PPM-type phosphatase domain signature. 108 116 IPR000222 GO:0043169
Lan18g0863 363 Pfam Protein phosphatase 2C 70 321 IPR001932 -
Lan18g0863 363 Gene3D - 53 333 IPR036457 -
Lan18g0863 363 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 11 351 - -
Lan18g0863 363 MobiDBLite consensus disorder prediction 1 44 - -
Lan18g0863 363 ProSiteProfiles PPM-type phosphatase domain profile. 69 329 IPR001932 -
Lan18g0863 363 CDD PP2Cc 69 329 IPR001932 -
Lan18g0863 363 SMART PP2C_SIG_2 97 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0863 Lan-Chr18 14009606 14016502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0863 52 361 PP2C-type Phosphatase Gene Family AT3G51470 77.097 2.19e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0863 K14803 - gmx:100781874 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0454 17 3445370 3448732 Lan18g0863 18 14009606 14016502 LSH
Lan18g0863 18 14009606 14016502 Lan6g0411 6 3296237 3299765 LSH