Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0861 ATGACATGCGCTATTAGATTCCTCACTGAGAAAGTTACAGAGGTAGCAGAGGCTGCGCCGCCGCCGGAGGCGGTACAGTTGGAATCTGATTTCGTTGTTATCTTGGCGGCGCTGCTCTGCTCCTTAATATGCGTCGTGGGACTAATCGCCGTCGCACGGTGCGCGTGGCTCCGGCGAGTTCCTGTTGCCGGAAACTCGCCGTCGCAAGCTGTAGCGAATAAGGGACTGAAGAAAAAGGTGCTTCAATCGCTGCCGAAGTTCTCTTACGCTGAAAGCAATCCGAGCAAGTGGTTGGCGACACCGGAATGCGCGATTTGCCTGTCGGAGTTTGCCGGCGGGGACGAGATCCGGGTGCTGCCGCAGTGCGGGCACGGATTCCATGTGGGATGCATAGACACGTGGCTTGGATCGCACTCGTCGTGCCCTTCATGTCGGCAGGTGCTGGCGGTGGCAAGGTGTCAGAAGTGTGGCCGGTTCCCGGCGGTTGGCGGAGGAGGTGGCAGCGCATCCAACGGTGCGGTGGTTAATGAACGGGAGCTGAAGTCAAGAGAAGACGACAATGGCGTTGCAAATAATAATAGCATCGGTAGCAGTTGTAGTAACATGGTGGGACATCATAGTCCTAACGATAGTAGTAATTTTTTCCTGCCTTGA 654 0.5581 MTCAIRFLTEKVTEVAEAAPPPEAVQLESDFVVILAALLCSLICVVGLIAVARCAWLRRVPVAGNSPSQAVANKGLKKKVLQSLPKFSYAESNPSKWLATPECAICLSEFAGGDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQVLAVARCQKCGRFPAVGGGGGSASNGAVVNERELKSREDDNGVANNNSIGSSCSNMVGHHSPNDSSNFFLP* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0861 217 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 17 189 - -
Lan18g0861 217 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 17 189 - -
Lan18g0861 217 SUPERFAMILY RING/U-box 81 150 - -
Lan18g0861 217 CDD RING-H2_PA-TM-RING 102 145 - -
Lan18g0861 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 150 IPR013083 -
Lan18g0861 217 SMART ring_2 103 144 IPR001841 -
Lan18g0861 217 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Lan18g0861 217 Pfam Ring finger domain 102 145 IPR001841 -
Lan18g0861 217 SMART FANCL_C_2 99 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0861 Lan-Chr18 13991229 13992209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0861 5 156 C3H Transcription Factor Family AT1G76410 62.893 2.01e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0861 - - vun:114170353 298.516