Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0860 ATGGAGGGAAAAACATACGAAGAATTCACAGCCAGGTATTATGGCCTTTGCACCATTGGAGGAATACTCAGTGCTGGTACTACCCATGTTGCTCTCACTCCTCTTGATGTATTGAAAGTCAACATGCAGGTGCATCCGATTAAGTATTATAGCATTTCGTCTTGCTTTACTACCTTAATGAGGGAGCAAGGGCCTTCTGCTCTCTGGAGAGGTTGGGCTGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGCTGTAGGTTTGGTCTCTATGAATATTTCAAGCAGGTTTATACCAACATTTTGGTAGACCAGAACAGAAATATTGTTTACTTTCTTAGTAGTGCATCTGCTGAAGTATTTGCTAATGTCGCTCTGTGCCCATTTGAAGCTATCAAAGTGAGGGTTCAAGCTCAACCCTGTTTTGCTAAGGGCCTGCTTGATGGAATTCCAAAGTTATATGCATCAGAAGGCATACAAGGATTCTACCGTGGACTTGTACCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCTGCATTCGAGCATTCAGTTGATTTTTTGTATCGCAACGTTGTCAAAAGAAAAAAAGAGGACTGTTCTAAATTGCAACAACTCGGTGTAACATGTTTAGCTGGATATGCAGCTGGATCTATTGGAAGCTTTATTTCTAATCCTGCTGACAATGTTGTTGCTTCTCTTTATAACAGAAAGGCTGATAGTCTCGTGCTGACTGTCAGAAAAATTGGGCTAGCTAATCTATTTACTAGGAGTCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCTATTACTTTGCAATGGTTTTTCTATGACACCATCAAAATTTTAGGTGGACTACCAACTAGTGGTGAAGTTTTAACCGACTTAAGAGGAGACGAGGCTGGCTAG 915 0.4131 MEGKTYEEFTARYYGLCTIGGILSAGTTHVALTPLDVLKVNMQVHPIKYYSISSCFTTLMREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKQVYTNILVDQNRNIVYFLSSASAEVFANVALCPFEAIKVRVQAQPCFAKGLLDGIPKLYASEGIQGFYRGLVPLLGRNIPFSMVMFSAFEHSVDFLYRNVVKRKKEDCSKLQQLGVTCLAGYAAGSIGSFISNPADNVVASLYNRKADSLVLTVRKIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKILGGLPTSGEVLTDLRGDEAG* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0860 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 189 IPR018108 -
Lan18g0860 304 Pfam Mitochondrial carrier protein 18 98 IPR018108 -
Lan18g0860 304 Pfam Mitochondrial carrier protein 107 193 IPR018108 -
Lan18g0860 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 285 IPR018108 -
Lan18g0860 304 SUPERFAMILY Mitochondrial carrier 16 281 IPR023395 -
Lan18g0860 304 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 3 301 IPR044677 GO:0005315|GO:1990547
Lan18g0860 304 Gene3D Mitochondrial carrier domain 17 284 IPR023395 -
Lan18g0860 304 PANTHER PHOSPHATE CARRIER PROTEIN 3 301 - -
Lan18g0860 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 96 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0860 Lan-Chr18 13980768 13984952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0860 1 294 Chloroplast and Mitochondria Gene Families AT2G17270 65.763 4.60e-151 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0860 K15102 - gmx:100788561 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0860 18 13980768 13984952 Lan6g0404 6 3245777 3249987 LSH