Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0852 ATGGGTCCACGGTGGAGCCTCCTCATCACCGCCATAACCATACTACTCCTCTCCCCGCCGGCAACCTCTCAACCCAAAACTCCCAAACAAAATAGTAGAGCTCTCTCCAATGAATCATACGTTTATGGTTTCTTCAATGAATCATACGCTTATGGTTCCTTAACCGGTATCTTCGACGTCAAAGGCAATGCTGCAATAAACCTCAATGCTCTTCAGATCACTCCTGACAGCGCCGGAAACATCTCCCACGTTAACAAATACGGTAGAGTATTCTTAAAGAGATCCTTCAAGTTATGGGACGATGAAAACGGTGATTTCAATGGAAAACTCGCTTCCTTCAACACTTCCTTCCTTTTTAACTTTTATAAGGTTAATCACACTCCTGGTGAAGGCATGGCCTTTGTTATTGCACCATCTTCCGCCATTCCTGATAACAGTTACGGCCAATATCTTGGCCTGAGTAACTCCACCACCGACGGAAAATCTTCCAACAAGTTTGTTGCTATTGAATTTGACAGTTTCAAACAAGATTTTGACCCAGATGACAATCACATTGGACTTGACATCAATAGTGTCAGGTCCAACATGACTGTTTCTTTGTCCAAGTTTGGGTTTCAGCTCGCTCAAAATACACATGACTGGGTGGTTTGGGTGGAGTATGATGGAGAACGCAAAGAAATTAACGTGTACATGGCAAAGCAGGCTAATAGGTTTGCTCCTATAGTGGCGAAACCAACCCAGCCTGTGTTTAGTTCGAGTCTTGATCTCAAAGGGTTGGTGAATCAAAAGTCTTATTTTGGATTCGCTGGTTCAACAGGACTTAGCTATGAGTTGCACTGTGTGTTACGATGGAATATATCTATTACGTCTTTTCCTGAAGATAATAGTAAGTTTAGCAATGCCATAAAGATTGGTTTAATTGTTGGGGTGCCTTTGATTATGATAGGGATTGCTGGGTTGGTGTATTTTATTATAGTTAAGAAGAAATGTTTAAGTTCCTCTGACCCTCAAATTATGGGCACCTTGAAGAGTCTCCCTGGAACCCCAAGAGAATTTAGGTACAAGGAATTGAAGAAAGCTACTAATAATTTTGATAACAAGAATAAACTTGGTCAAGGTGGGTTTGGTGTGGTTTATAAAGGAACATTAGCAAAAGAGGATTTGGAAGTTGCTGTTAAGATGTTTTCAAGGGACAAGATGAAAAGCACAGATGATTTCTTGTCTGAGCTAACCATTATCAATCGTCTTCGTCACAAAAATCTTGTTCGATTACTAGGGTGGTGTCACAAAAACGGGATGTTGCTCTTAGTATATGAATATATGCCCAATGGTAGCTTGGACAGACATATTTATGGTCAACAAGGGTCAACCATTGAAACCCCTCTAAGTTGGAAACTAAGGTATAACATCATATCAGGGGTTGCTCATGCATTGAATTACATACATAGTGAGTATGATCAAAAAGTAATTCACCGAGACCTCAAGGCAAGCAACATCATGTTGGATTCAGACTTCAATGCTCGTTTAGGTGACTTCGGCTTGGCGCGTGCAATCGAGAATGAGAAAACATCCTATGCAGAATTGGAAGGAGTACAGGGCACCATTGGGTACATTGCACCTGAATGCTTTCACACGGGCAAAGCCACTTGCGAGTCAGATGTTTATGGATTCGGGGCTGTCCTACTAGAAGTGGTGTGCTGTCAGCGGCCGTGGACATCGAACGAGGGCTATCAGTTGTTGGTGGATTGGGTTTGGTTCTTGTATCGCGAGGGAAGGATACTGGAAGCAATAGACCCAAAACTTGGGAATGATTATGAGGTAGAAGAGGCAGAGAGGGTCTTGAAATTAGGACTAGCATGCTCTCATCCCATTGCTAGTGAAAGGCCTAAAATCCAAGCAGTTGTTCAAATCATATCTGGGTCAGTGCCTGTGCCTAATGTCCCACCTCTGAAGCCATCTTTTGTGTGGCCAGCTTTGGATTTTGCAAGCCTTGTTGGTGACTCTACATCAACAACTATTACTGACTCACAGTTTAACACAAGATCTTCTTCTATGCAGTTGAAATCATTTGATGTCAGCTCCAAGGCCTAA 2091 0.4237 MGPRWSLLITAITILLLSPPATSQPKTPKQNSRALSNESYVYGFFNESYAYGSLTGIFDVKGNAAINLNALQITPDSAGNISHVNKYGRVFLKRSFKLWDDENGDFNGKLASFNTSFLFNFYKVNHTPGEGMAFVIAPSSAIPDNSYGQYLGLSNSTTDGKSSNKFVAIEFDSFKQDFDPDDNHIGLDINSVRSNMTVSLSKFGFQLAQNTHDWVVWVEYDGERKEINVYMAKQANRFAPIVAKPTQPVFSSSLDLKGLVNQKSYFGFAGSTGLSYELHCVLRWNISITSFPEDNSKFSNAIKIGLIVGVPLIMIGIAGLVYFIIVKKKCLSSSDPQIMGTLKSLPGTPREFRYKELKKATNNFDNKNKLGQGGFGVVYKGTLAKEDLEVAVKMFSRDKMKSTDDFLSELTIINRLRHKNLVRLLGWCHKNGMLLLVYEYMPNGSLDRHIYGQQGSTIETPLSWKLRYNIISGVAHALNYIHSEYDQKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYAELEGVQGTIGYIAPECFHTGKATCESDVYGFGAVLLEVVCCQRPWTSNEGYQLLVDWVWFLYREGRILEAIDPKLGNDYEVEEAERVLKLGLACSHPIASERPKIQAVVQIISGSVPVPNVPPLKPSFVWPALDFASLVGDSTSTTITDSQFNTRSSSMQLKSFDVSSKA* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0852 696 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Lan18g0852 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Lan18g0852 696 Gene3D Phosphorylase Kinase; domain 1 349 440 - -
Lan18g0852 696 SUPERFAMILY Protein kinase-like (PK-like) 346 665 IPR011009 -
Lan18g0852 696 PANTHER - 55 677 - -
Lan18g0852 696 Pfam Legume lectin domain 58 295 IPR001220 GO:0030246
Lan18g0852 696 Gene3D - 39 302 - -
Lan18g0852 696 CDD lectin_legume_LecRK_Arcelin_ConA 39 289 IPR001220 GO:0030246
Lan18g0852 696 ProSiteProfiles Protein kinase domain profile. 364 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0852 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 58 290 IPR013320 -
Lan18g0852 696 CDD STKc_IRAK 370 638 - -
Lan18g0852 696 Pfam Protein kinase domain 365 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0852 696 Gene3D Transferase(Phosphotransferase) domain 1 441 642 - -
Lan18g0852 696 SMART serkin_6 364 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0852 696 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 55 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0852 Lan-Chr18 13857543 13861873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0852 37 653 Receptor kinase-like Gene Family AT3G53810 37.596 1.09e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan18g0852 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0852 - - gmx:100780014 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0852 18 13857543 13861873 Lan6g0396 6 3174463 3179000 LSH