Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0844 ATGAAGCCTTTTTCTGTTACATTCCCTGTATTTTGGTTTATATACATTGACTTGCTTCTTTTCTTTGCTTCAGCATGGTTTGTCCCAAACACAAGTGCCTCTACATTAGGAAATGAGACTGATCATTTGGCATTGCTCAAATTCAAGGAATCAATATCCAAAGACCCTTATGGAGTGTTGAACTCTTGGAATAGTTCTAACCACTTCTGCAACTGGGATGGAATCACATGCAGTCCCATGCATCAAAGAGTTACAAAGCTGAACCTACCAGGATATCAGCTGCATGGAACCATAACTCCTCAAGTTGGAAACTTCACTTTTCTGAAACTCCTTGACCTCCACAACAATAGCTTCTATGGAAAAATCCCACAAGAATTGGGTGGTTTATTACAGATGAAGGCACTATATCTGACCAATAATTCCTTAGATGGTGAATTTCCTATAAGCTTGACAAATTGTTCTCAACTCATACACTTATACTTGTATGGTAACAATTTGAGTGGCAAAATACCAGCTGAAATTGGCTCTCTTAGAAAGCTTGAAATGTTGTTCCTTGGGAAGAACAATTTTGATGGGCAAATACCACAATCCATAGGGAATCTTTCATCCCTTGTTTATTTCAGTGTAGGTTTCAGTAACTTGGAGGGTTATATTCCACAAGAAATAGGCCTTTTGAGAAACTTGACATTTATATCAGTGGATGCCAACAAATTTTATGGTATGCTCCCATCTACTCTCTTCAATTTATCATATCTCACAGTAATCTCAGCTACTAGTAATCAATTTAATGGTTCTCTTCCACCAACCATGTTCCATACCCTCCCCAATCTCAAGTTCTTTTCAGTATATGGGAATCAACTCTCAGGTCCAATACCCATTTCTATCACCAATGCATCAGTCCTTCAACTTCTTGATCTTGGTGAAAACTCTTTTGTAGGACAAGTTCCAAGTCTAGGGAAGATGCAAGATGTATGGCTCATAAATTTGGAAGGAAACAATTTAGGTGACAATTCAACTGAGGACTTGGATTTTTTAAAACCATTGACAAATTGTAGCAAGTTGAGTACATTTGGTATAGACAACAATAATTTTGGAGGTCGTTTACCAAATTTCTTGGTAAACTTTTCCTCCCAACTAACTGAACTATATCTTGGGAATAACCAAATATTAGGAAAACTTCCTACAGATTTGGGAAATCTAACTGGTTTAATTGTCTTGAGCATGGAATCTAACCATTTAGATGGTGTTATTCCCCCGGCTTTCGGGAATTTTCAGAAGATACAATTGTTAGACTTGAATGGAAACAAACTATCAGGAGATATTCCAGCCTCCTTAGGCAACCTCAGTCAGTTGTTTTCTTTGGACTTATCACAAAATATGTTCCAAGGAAACATTCCTCCAACTATAGGAAACTGCCAAAAGTTACAATTCCTAGACCTTTCTCAAAACAACCTTGTAGGATCCATACCCTCAGAGATTTTTAGTATTTCCTCTTTGACAAACTTATTGAACTTGTCACAAAATTTATTTAGTGGCAATCTATCAGATGAAGTGGGAAGGCTAAAAAATATCGAACAACTCGATATATCTGGCAATCATTTATCTGGTGACATTCCTGGAGCTATTGGAGAATGCTTGAGCTTGGATCACCTTTATTTGCAAGGGAATTCCTTCAGTGGAATCATACCATCTTCTTTGGATTCACTGAAAGGTCTTCAACGTCTAGACCTGTCACGAAACAACTTATCTGGATCAATACCTGAAGGATTGCAAAATATTACTGTTTTAGAATACTTGAATGTTTCTTTTAACATGTTGGATGGTGAGGTACCAACAGAAGGTGTCTTTCAAAATTCTAGCAGGTTTTCCATAACTGGAAACAGTAAGCTTTGTGGGGGTATTACAAAGCTAAAACTACCACCATGCCCTGCCAAAGGCACAAAACATGAAAAACACTACAATTTTAAGAAGTTGATAGCAGTGTTAGTTTGTGTAGTGGCTTTTCTTCTCATATTGTCACTTAGCCTAACTTTATGCTGGATGAGAAAAAGAAACAAGAAACCATTTTCTGATCTACCAACAATTGACCAGTTAGTTAAGGTTTCATACCAAAACCTACATAATGGAACTGATGGATTCTCAGCTAAAAACTTAATAGGATCTGGAAATTTTGGCTTCGTCTTCAAAGGAACACTTGAGTCAGAAAATAAAGTTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCAGAGTGTAATGCGCTGAGAAATATTAGGCATCGGAATCTGGTTAAGATTTTAACATGTTGTTCCAGTACAGATTACAAAGGTCAAACATTTAAAGCTCTAGTTTTTGAGTACATGGCAAATGGAAGCTTAGAACAATGGTTGCATCCAGCAGCAGAAACTGCACAACAATCCAGAACACTGAATCTTGCTCAAAGATTCAATATTATTACTGATGTTGCTTCTGCAATCCATTATCTTCACTATGAATGTGAGCAAGCTATCATTCATTGTGATTTAAAGCCGAGCAATATTCTTATTGATGATTGCTTGGTAGCACATGTCAGTGATTTTGGCATAGCTAGGTTGCTCTCAAGTATTGGAGTCTCTTCAGAGCAAACTAGCACAACCGGAATAAAGGGGACTATTGGTTATGCTCCTCCAGAATATGGAATGAGTTCTGAGGTATCAATTGAAGGCGACATGTATAGCTTCGGAATTCTTGTTTTAGAAATTTTATCAGGAAAAAGACCTACAGATGAAATGTTTAAAGATGGTCAAAATCTTCATAACTATGTCAAAAATTCAATTCCGGACCACCTTTTGCAGATTGTGGACCCAACTATTCTCCCAGAGGAATTCGAACTGGATGGTGACAATGAGATCATGATACTTACAGATCCTAATGTAAAGGAAAGCTTACTTTCACTTTTTAGTATTGCACTGGCTTGTTCAGTGGAATCACCAAATCAAAGAATGAGTATGGTTGATGTGATTAAGGAGCTTAATGAGATCAAAAGTTCATTCTTTGTGGTGTAA 3066 0.3715 MKPFSVTFPVFWFIYIDLLLFFASAWFVPNTSASTLGNETDHLALLKFKESISKDPYGVLNSWNSSNHFCNWDGITCSPMHQRVTKLNLPGYQLHGTITPQVGNFTFLKLLDLHNNSFYGKIPQELGGLLQMKALYLTNNSLDGEFPISLTNCSQLIHLYLYGNNLSGKIPAEIGSLRKLEMLFLGKNNFDGQIPQSIGNLSSLVYFSVGFSNLEGYIPQEIGLLRNLTFISVDANKFYGMLPSTLFNLSYLTVISATSNQFNGSLPPTMFHTLPNLKFFSVYGNQLSGPIPISITNASVLQLLDLGENSFVGQVPSLGKMQDVWLINLEGNNLGDNSTEDLDFLKPLTNCSKLSTFGIDNNNFGGRLPNFLVNFSSQLTELYLGNNQILGKLPTDLGNLTGLIVLSMESNHLDGVIPPAFGNFQKIQLLDLNGNKLSGDIPASLGNLSQLFSLDLSQNMFQGNIPPTIGNCQKLQFLDLSQNNLVGSIPSEIFSISSLTNLLNLSQNLFSGNLSDEVGRLKNIEQLDISGNHLSGDIPGAIGECLSLDHLYLQGNSFSGIIPSSLDSLKGLQRLDLSRNNLSGSIPEGLQNITVLEYLNVSFNMLDGEVPTEGVFQNSSRFSITGNSKLCGGITKLKLPPCPAKGTKHEKHYNFKKLIAVLVCVVAFLLILSLSLTLCWMRKRNKKPFSDLPTIDQLVKVSYQNLHNGTDGFSAKNLIGSGNFGFVFKGTLESENKVVAIKVLNLQKKGAHKSFIAECNALRNIRHRNLVKILTCCSSTDYKGQTFKALVFEYMANGSLEQWLHPAAETAQQSRTLNLAQRFNIITDVASAIHYLHYECEQAIIHCDLKPSNILIDDCLVAHVSDFGIARLLSSIGVSSEQTSTTGIKGTIGYAPPEYGMSSEVSIEGDMYSFGILVLEILSGKRPTDEMFKDGQNLHNYVKNSIPDHLLQIVDPTILPEEFELDGDNEIMILTDPNVKESLLSLFSIALACSVESPNQRMSMVDVIKELNEIKSSFFVV* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0844 1021 Gene3D Ribonuclease Inhibitor 37 321 IPR032675 -
Lan18g0844 1021 CDD STKc_IRAK 719 1014 - -
Lan18g0844 1021 SMART serkin_6 713 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0844 1021 Gene3D Ribonuclease Inhibitor 322 651 IPR032675 -
Lan18g0844 1021 SUPERFAMILY Protein kinase-like (PK-like) 687 1011 IPR011009 -
Lan18g0844 1021 SMART LRR_sd22_2 376 402 - -
Lan18g0844 1021 SMART LRR_sd22_2 424 450 - -
Lan18g0844 1021 SMART LRR_sd22_2 177 203 - -
Lan18g0844 1021 SMART LRR_sd22_2 569 592 - -
Lan18g0844 1021 SUPERFAMILY L domain-like 39 334 - -
Lan18g0844 1021 ProSiteProfiles Protein kinase domain profile. 713 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0844 1021 Pfam Leucine rich repeat 404 460 IPR001611 GO:0005515
Lan18g0844 1021 Pfam Leucine rich repeat 133 190 IPR001611 GO:0005515
Lan18g0844 1021 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Lan18g0844 1021 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Lan18g0844 1021 SMART LRR_typ_2 473 496 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 448 472 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 569 592 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 225 249 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 521 545 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 400 423 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 593 618 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 105 129 IPR003591 -
Lan18g0844 1021 SMART LRR_typ_2 177 201 IPR003591 -
Lan18g0844 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Lan18g0844 1021 Gene3D Transferase(Phosphotransferase) domain 1 795 1018 - -
Lan18g0844 1021 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Lan18g0844 1021 PANTHER LRR RECEPTOR-LIKE KINASE 26 1019 - -
Lan18g0844 1021 Pfam Protein kinase domain 715 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0844 1021 Gene3D Phosphorylase Kinase; domain 1 694 794 - -
Lan18g0844 1021 PANTHER OS04G0122200 PROTEIN 26 1019 - -
Lan18g0844 1021 SUPERFAMILY L domain-like 346 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0844 Lan-Chr18 13809303 13812856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0844 38 1019 Receptor kinase-like Gene Family AT3G47570 45.372 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan18g0844 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0844 - - gmx:100792724 1335.09