Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0843 ATGGAACTACTAAGTACTATGTTTACCTTGTTTGCTTCTTTTCTCTTCATTCTTGTTCTTTTCAAGACACTCATAAAACACTTTGTCTCCAAACGCCAACACTTGCCACTCCCACCTGGTTCCATGGGTTATCCTTACATAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTTTTCTTTGCCACAAAAATAAAAAGGTATGGGTCGATGTTCAAGTCTCACATTTTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCTGCAAAGTTTGTGCTCAACAAAGCTAACCTCTTCAAACCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCTATATTCTTTCACCAAGGAGAGTACCATGCTAATTTGAGGAGACTTGTGCTTCGAACCTTCATGCCTGAAGCCATCAAAAACATTGTTCCTGCCATTGAATCCATTGCCCAAGATTGTCTTAAATCATGGGAAGGACGTGAAATAACCACTTTCCTTGAAATGAAGACGTTCACCTTCAATGTTGCCCTACTTTCAATATTTGGCAAAGAAGAAGTTCTCTACAGAGAGGAACTGAAAATGTGTTACTACACTCTTGAACAAGGTTACAATTCAATGCCAATTAACCTTCCTGGAACACTATTCCAAAAGGCCATGAAAGCAAGGAAGGAACTTGCACAAATCGTGGCACATATAATCTCAAAGAGGAGGCAAGGGAAACAAGATTACAAGGACTTGTTGGGTTCATTCATGGAAGAGAAAGCAGGGCTCACAGATGAACAAATAGCAGATAATGTAATTGGTGTCATATTTGCAGCGCGTGACACCACTGCCAGTGTGCTTACGTGGATTGTTAAGTACCTTGGTGAAAACCCTAGTGTCCTACAAGCTGTAACTGAGGAACAAGAATCTATATTGAAGAGCAAGGATGAAAGTGGTGAAGAGAAGGGTTTGAATTGGGAAGATGCCAAAAAGATGCAAATAACTTCAAGGGTTATACAAGAAACTCTAAGAGTTGCTTCAATTTTGTCTTTTACATTTAGAGAAGCAGTGGAAGATGTTGAGTATCAAGGGCATCTTATACCAAAAGGATGGAAAGTACTACCACTATTCAGAAACATACACCATAGTCCAGATAACTTCAAAGAGCCAGAGAAGTTTGATCCCTCAAGATTTGAGGCTGCTCCAAAACCCAATACTTTTATGCCATTTGGAAGTGGGATCCACGCGTGTCCAGGGAATGAATTAGCCAAGTTGGAGATGTTAGTGCTTCTACATTATCTGACAACAAAATACAGGTGGTCTATGGAGGGTGCTAAGAATGGAATCCAATATGGCCCTTTTGCTCTTCCCCAAAATGGCTTGCCTATTACATTATATCCCAAGAAGTAG 1401 0.4033 MELLSTMFTLFASFLFILVLFKTLIKHFVSKRQHLPLPPGSMGYPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKANLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPAIESIAQDCLKSWEGREITTFLEMKTFTFNVALLSIFGKEEVLYREELKMCYYTLEQGYNSMPINLPGTLFQKAMKARKELAQIVAHIISKRRQGKQDYKDLLGSFMEEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLQAVTEEQESILKSKDESGEEKGLNWEDAKKMQITSRVIQETLRVASILSFTFREAVEDVEYQGHLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEAAPKPNTFMPFGSGIHACPGNELAKLEMLVLLHYLTTKYRWSMEGAKNGIQYGPFALPQNGLPITLYPKK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0843 466 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 13 463 - -
Lan18g0843 466 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 SUPERFAMILY Cytochrome P450 32 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Lan18g0843 466 PANTHER CYTOCHROME P450 26 13 463 - -
Lan18g0843 466 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g0843 466 Gene3D Cytochrome P450 27 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0843 Lan-Chr18 13792554 13795009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0843 1 436 Cytochrome P450 AT5G45340 74.142 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0843 K09843 - gmx:100170674 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0843 18 13792554 13795009 Lan18g0843 18 13792554 13795009 ECH
Lan17g0475 17 3654693 3657833 Lan18g0843 18 13792554 13795009 LSH
Lan18g0843 18 13792554 13795009 Lan6g1536 6 22513127 22517203 LSH