Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0835 ATGTTGAACACTAACAAGGAGTTTGAGGCCTCAAAGTATGGGAAATTTGAAATCAAACTCAAGAGGAAAAGTGTTGTAAAAGCTGTCAATCATTCACCAAACCCATTTTCAGTCCCTCTCTCAAATCTTGACCTACTTTCAGGTCGTTTTCCTGTTACATACATATATTTCTACCACAAACCAAAAGTAGAAAATTTTAGAACTTTTGTTGAGTCTCTTAAGAGCTCTCTAGCACAAGTACTTAGTTACTACTATCCCTTTGCTGGCCAAATTGTTCAAAATCCTATAACTTTTGAGCCTGAAATCATTTGTGACAACAAGGGTGCTCTACTCATTCAAGCTCATGTGGATATTCCACTAAAGAAGCTAGATTTCTATAATCTAAATGAAACCTTTCAAGAAAAGATAGTTTCTATTCAACCAGATTTCCCCTTACAAATTCAGGTAACAAACTACACTTGTGGAGGCATTTCCATTGCATTTAGTTTTGACCATGCATTAGGTGATGCAAGTTCCTTTGGTAAATTTATTACCTCATTGTGTGAGATAGCTCAAAATAAACCAATATCATGCATACCAAACCATACTAGACACCTACCTCCACGTTCACCTCTCAAATATCAACCATCCTTAGACCAAACTTTTATCAAATGCACCAAAGAAGAGATAAATAACATCCCAATGAGCCATATCTCACTTAAGAGACTTTATCATATCAATGCATCAAGTATTAATATGCTGCAAAGACTTGCATCTAATGGTAGCACCAAGAGAACAAAGATTGAGGCTTTTTCTGCCTATGTATGGAAGATAATGGCTAGTAGCATTGATCAAAGTCATGAAAAATGCAAGATGGGTTGGTTGGTGGATGGAAGGGAAAGGATAAGTAAAGGTAAGAGTTCAATGTCAAATTACATTGGTAATGTTTTGTCATTGGCTTTCAGAGAAGCAAGCATTCAAGAATTGAAGGAAGCCTCTATATCAGATATTGGTAGCATAGTGAATGAGTCAATTTCAAAGGTGAACAATGAGGCTCATTTTTTGGATTTGATAGATTGGGTTGAGTGCAATAGGCCTGGTTTGATGCTAGCAAAGACAGTGTTGGGTCAGGAGGGACCAACCCTTGTTGTGTCCTCAGGAAGAAGGTTTCCTGTAACTGAAATTGACTTTGGATTTGGGAGTCCTTTGTTAGGGACAGTTTACACTTCCATTGAAAGGAGTGGAGTTGGTTACATGAATCAAAGGCCAAGTGCTAAGGGAGATGGATCATGGACTATATCTGCTATCTTGTGGCCTAAACTAGCAACTGTACTTGAAAATGACTCAATTTTCCAACCCATGTCAGCTTCTTATCTTAATCTTTAG 1365 0.3751 MLNTNKEFEASKYGKFEIKLKRKSVVKAVNHSPNPFSVPLSNLDLLSGRFPVTYIYFYHKPKVENFRTFVESLKSSLAQVLSYYYPFAGQIVQNPITFEPEIICDNKGALLIQAHVDIPLKKLDFYNLNETFQEKIVSIQPDFPLQIQVTNYTCGGISIAFSFDHALGDASSFGKFITSLCEIAQNKPISCIPNHTRHLPPRSPLKYQPSLDQTFIKCTKEEINNIPMSHISLKRLYHINASSINMLQRLASNGSTKRTKIEAFSAYVWKIMASSIDQSHEKCKMGWLVDGRERISKGKSSMSNYIGNVLSLAFREASIQELKEASISDIGSIVNESISKVNNEAHFLDLIDWVECNRPGLMLAKTVLGQEGPTLVVSSGRRFPVTEIDFGFGSPLLGTVYTSIERSGVGYMNQRPSAKGDGSWTISAILWPKLATVLENDSIFQPMSASYLNL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0835 454 Gene3D - 15 208 IPR023213 -
Lan18g0835 454 Pfam Transferase family 17 433 - -
Lan18g0835 454 Gene3D - 219 440 IPR023213 -
Lan18g0835 454 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 39 450 - -
Lan18g0835 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0835 Lan-Chr18 13701563 13703039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0835 17 430 Monolignol Biosynthesis Gene Families AT5G48930 23.973 1.49e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0835 - - gmx:100795616 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0835 18 13701563 13703039 Lan18g0835 18 13701563 13703039 ECH