Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0833 ATGATCTTGGTACTTATTTGGTATCACACCCCACTTCACATTTCCACAACTCATTCTCCTAAAAAAATGAAGGAACCATCATCAAAATCAAAGCCATGGAGGCCATTCACAGCAAATTGTTGTACAAGTGAGGATCAAACAATCTTTAGAAACTTCAGCAGATGCAAAACCTCACGTTCAGATTTTTCTAAGAACATTGCTCCTTTACCATCATTTAGGAGGCTTTCTTTCTCTGATCTTAGCCGTTCATCTTCCATAAGAATCAATGAGGATCTTGCACAGTCTTTTGGTGCTGATTTGTATGATTTTCAGCTTAGTGAACTGCGTGCCATCACACAGAATTTTTTAAGCAATTTCTTGCTTGGTGAAGGTGGGTTTGGAACTGTGCATAAGGGTTATATTGATGATAACTTGAGGCAGGGTTTAAAGGCTCAACCTGTTGCTGTTAAACTTCTTGATATTGAAGGTTTACAAGGACACCGGGAATGGCTTGCAGAAGTGATATTTCTTGGGCAGCTAAGACACCCAAACTTGGTTAAGTTGATTGGTTATTGTTGTGAGGATGAAGAAAGATTACTTGTCTACGAATTCATGCCAAGAGGAAGTTTGGAGAATCACTTGTTCAGAAGGCTAACATCACTGCCTTGGGCAACAAGACTAAAAATTGCAATAGGTGCTGCTAAGGGTCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTATAGAGACTTCAAGACTTCTAATGTGTTGCTTGATTCAGACTTCACAGCAAAATTGTCAGATTTTGGACTGGCCAAAATGGGGCCTGAGGGATCAAAATCACATGTTACGACCAGAGTTATGGGCACCTATGGATATGCAGCCCCCGAATACATCTCAACAGGGCACTTGACCACAAAAAGTGATGTCTACAGCTTTGGTGTAGTCCTGCTAGAACTACTAACAGGAAGGAGATCTATGGAAAAGGCAAGACCAAAAGCTGAGCAAAACCTTGTAGATTGGTCAAAACCATACTTGAATAGCAGTAGGAGGTTGAGGTATATTATGGATCCTAGGCTTGCAGGCCAATATTCTGTTAAGGGTTCAAAGGAAATGGCCCTGTTGGCATTGCAAAGCATAAGTTTGAATCCTAAAGATAGACCAAGAATGGCAACCATTGTTGAAACTCTTGAAAGCCTGCAACAGTTCAAGGACATGGCTGTTACCAGTGGACACTGGCCAGCAGCATCAAAATCTACTAGAAATGGAGCTTCCAATAAGGTGAAAAACAGAGCTGTTGCAAATCACAAGCAACCCTCTCCTCCAGTTTCTATGGTGATTGCAATGCTGCACCTAAGTACAATGCTAAAGATTCAGCATGTAACTTTGCCAGGCTTCAAAGGATGCCATGGCGAATCTGTTTCTGCTTCAACCGTAGCTGATCAGAAATCACAAAATAGAATTTGGGAAATAGTAACAGGTCTTGTTAATGATCATAGAGTGGATGAAACATGTCTTATCGTTCTTACTAAAGAAATGGAGAGTCTAACATTACAAAATTGA 1545 0.4071 MILVLIWYHTPLHISTTHSPKKMKEPSSKSKPWRPFTANCCTSEDQTIFRNFSRCKTSRSDFSKNIAPLPSFRRLSFSDLSRSSSIRINEDLAQSFGADLYDFQLSELRAITQNFLSNFLLGEGGFGTVHKGYIDDNLRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWATRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMEKARPKAEQNLVDWSKPYLNSSRRLRYIMDPRLAGQYSVKGSKEMALLALQSISLNPKDRPRMATIVETLESLQQFKDMAVTSGHWPAASKSTRNGASNKVKNRAVANHKQPSPPVSMVIAMLHLSTMLKIQHVTLPGFKGCHGESVSASTVADQKSQNRIWEIVTGLVNDHRVDETCLIVLTKEMESLTLQN* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0833 514 Gene3D Transferase(Phosphotransferase) domain 1 198 408 - -
Lan18g0833 514 PANTHER SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED 49 425 - -
Lan18g0833 514 ProSiteProfiles Protein kinase domain profile. 115 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0833 514 SUPERFAMILY Protein kinase-like (PK-like) 99 392 IPR011009 -
Lan18g0833 514 ProSitePatterns Protein kinases ATP-binding region signature. 121 150 IPR017441 GO:0005524
Lan18g0833 514 CDD STKc_IRAK 121 394 - -
Lan18g0833 514 Gene3D Phosphorylase Kinase; domain 1 78 197 - -
Lan18g0833 514 PANTHER OS01G0588500 PROTEIN-RELATED 49 425 - -
Lan18g0833 514 Pfam Protein tyrosine and serine/threonine kinase 121 391 IPR001245 GO:0004672|GO:0006468
Lan18g0833 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0833 Lan-Chr18 13687571 13692840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0833 103 428 Glycoside Hydrolase AT3G07070 48.358 2.45e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan18g0833 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0833 - - lang:109333209 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0833 18 13687571 13692840 Lan18g0833 18 13687571 13692840 ECH
Lan18g0833 18 13687571 13692840 Lan6g0431 6 3602323 3604623 LSH