Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0830 ATGGACATTTTTATGATGAAATGGCAATGGCCATGGTTTCTTTATGTTCTGCTGATACATATTGTCATCAATAAAAGCAAAGCGCTCAGTCCTGATGGTGAGGTACTTATCAGCTTCAGGACAGCAGTTGTTAGCTCATATGGTGTCCTGTTACAATGGAGACCTGAGGACCCTGACCCATGTAAATGGAAAGGAGTTAAATGTGATCCCAAAACCAAGAGAGTAACTCATCTGAGTCTATCTCATCATAAGTTGAGTGGGTCTTTATCACCTGACCTCGGGAAACTAGAGCATCTGAGGGTTCTTGCTCTGCACAATAACAACTTATATGGGACAATTCCATCAGCATTGGGAAACTGCACTGATTTGCAGGGAATATTTTTACAAGGTAATTACCTTAGTGGAACGATCCCGGGTGAAATAGGAAACCTTTCACAACTTCAGAATTTGGATATATCAAGCAACTCCCTTACTGGGGCTATTCCAGCATCACTTGGGAAGTTGTATAAACTCAAAAATTTCAATGTATCAGCCAATTTTCTGGATGGAACAATACCTTCTGATGGTGTCCTTGCCAACTTCACTGCGGTCTCCTTTGTTGGAAATCGTGGTTTGTGTGGAGTGCAAATCAATTCAATATGTAAAGGTTCACCTGGGGCAAATAATCAATCTAACCCAGATCAAAATCAAAATGGAAAGAAGAAATATTCTGGTCGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGTTTCTGGGGTTGCTTTCTTTATAAGAAATTTGGTAAAAATGACAGAATAAGTCTGGCAGTGGATGTTGGTGGAGGTGCATCAGTTGTGGTGTTTCATGGAGACCTGCCTTATTCTTCGAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGATAGGTGGATTTGGAAAGGTTTACAAGCTTGCAATGGATGATGGGAATGCATTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGATTTGATCGTTTTTTTGAGAGGGAACTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAACTTACGAGGATATTGTAATTCACCTACATCAAAGTTGTTGATATATGATTACCTACCTGGTGGCAGTCTTGACGAAGCTCTTCATGAAAGAACTGAGCCACTGGACTGGGATTCACGCTTGAATATAATACTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGAGACATAAAATCAAGCAACATTTTGCTTGATGCAAACCTGGATGCTCGGGTCTCTGACTTTGGACTCGCCAAACTTCTGGAGGATGAAGAAACTCACATTACAACTATTGTTGCCGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTCTATAGTTTTGGTGTGCTGACACTTGAAGTAATAAGTGGAAAGCGGCCAACGGATGCATCTTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTCATTACCGAAAATAGGCCAAGGGAAATTGTTGATTCACTATGTGAGGGGTTGCAGATGGAGAACCTTGATGCCTTGCTCTCTGTGGCGATTCAATGCATTTCCTCAAATCCAGAGGATCGACCCACCATGCACCGAGTGGTCCAGTTGTTTGAATCAGAGGTTGTAACCCCATGCCCAAGCGATTTCTATGACTCCAATTCTGACTAG 1779 0.4171 MDIFMMKWQWPWFLYVLLIHIVINKSKALSPDGEVLISFRTAVVSSYGVLLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSLSPDLGKLEHLRVLALHNNNLYGTIPSALGNCTDLQGIFLQGNYLSGTIPGEIGNLSQLQNLDISSNSLTGAIPASLGKLYKLKNFNVSANFLDGTIPSDGVLANFTAVSFVGNRGLCGVQINSICKGSPGANNQSNPDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAVDVGGGASVVVFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGKVYKLAMDDGNAFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERTEPLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDANLDARVSDFGLAKLLEDEETHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVISGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDSLCEGLQMENLDALLSVAIQCISSNPEDRPTMHRVVQLFESEVVTPCPSDFYDSNSD* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0830 592 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lan18g0830 592 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Lan18g0830 592 SUPERFAMILY Protein kinase-like (PK-like) 292 574 IPR011009 -
Lan18g0830 592 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0830 592 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 4 592 IPR031071 GO:0004672|GO:0005524|GO:0030244
Lan18g0830 592 Gene3D Transferase(Phosphotransferase) domain 1 383 580 - -
Lan18g0830 592 Gene3D Phosphorylase Kinase; domain 1 280 382 - -
Lan18g0830 592 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Lan18g0830 592 ProSiteProfiles Protein kinase domain profile. 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0830 592 ProSitePatterns Protein kinases ATP-binding region signature. 313 339 IPR017441 GO:0005524
Lan18g0830 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Lan18g0830 592 SUPERFAMILY L domain-like 30 197 - -
Lan18g0830 592 PANTHER RECEPTOR-LIKE PROTEIN 55 4 592 - -
Lan18g0830 592 Pfam Protein kinase domain 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0830 Lan-Chr18 13661544 13674198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0830 1 583 Receptor kinase-like Gene Family AT2G35620 74.144 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lan18g0830 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0830 - - gmx:100819230 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0830 18 13661544 13674198 Lan18g0830 18 13661544 13674198 ECH
Lan17g0484 17 3731494 3741427 Lan18g0830 18 13661544 13674198 LSH
Lan18g0830 18 13661544 13674198 Lan6g0433 6 3612777 3623370 LSH