Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0826 ATGGAAAGCAACGACATATTGGAGGAACTTCTTAACATCGATGTCGAGATTGAAGATGTTCAAGATCAAATAAGGGGTTTAATTGAGAGACAAGAGAAGTTGTACGAGAGAAAATCTGAGCTAAGTGCTATTCTTGAAGCTTGTAAAGATTCTGAGAATCAGATTAATAATGGGTCTGGGTCTGTTGAAAATTGGAGTGCTCCATTTGAATGGGATTCTCAAGCAGATGATCTCAGGTTGAATATTTTTGGCATTTCATCATACCGTGCAAATCAAAGAGAGATAATTAATGCCATCATGAGTGGAAGAGATGTTCTGGTGATTATGGCTGCAGGTGGTGGCAAGAGCCTTTGCTACCAGCTTCCTGCTGTTCTCCGTGACGGAATTGCACTTATTGTCAGCCCATTGCTTTCCTTAATTCAAGATCAGGTAATGGGTTTGACTGCTCTGGGCATTCCAGCTTATATGTTGACATCAACAACAAGTAAGGACAATGAGAAGTTCATATACAAAGCTCTGGAGAAGGGCGAGGAGGAACTAAAAGTATTGTATGTCACTCCGGAAAAGATATCAAAAAGCAAGAGGTTTATGTCAAAACTTGAAAAATGCAATCATGCTGGTCGTCTCTCTCTAATTTCAATTGATGAGGCACATTGCTGTAGTCAGTGGGGTCATGACTTTCGACCTGATTATAAGAACCTTGGTATTCTCAAAACTCAGTTTCCTAATGTCCCTATGGTTGCTTTGACTGCAACTGCTACTCAAAGGGTCCAAAATGATCTGATGGAGATGTTACGTATTCCTAGATGTGTCAAATTTGTCAGCTCAGTCAATAGGCCAAACTTGTTTTATATGGTAAAGGAAAAGTCATCTGTCGGTAAGGTCGTTATTGATGAAATTGCTGAATTCATTCAAGAATCTTATCCAAATAACGAATCCGGGATTGTTTATTGCTTCTCTCGCAAGGAATGTGAGCAGGTTGCAAAGGAGTTACGGGACAGAGGAGTTTCAGCTGATCATTATCATGCTGATATGGATGTAAACGCTCGGGAAAAAGTACATATGCGGTGGAGCAATAACAAGCTGAAGGTCATTGTTGGTACAGTTGCATTTGGTATGGGAATCAATAAACCAGATGTCAGGTTTGTCATCCATCACAGCTTGAGTAAATCAATGGAAACATACTATCAGGAAAGTGGTCGAGCTGGCCGAGATGGACTTCCTTCTGAATGCCTTCTATACTTTAGACCTGGTGATGTTCCCCGACAGAGTTCAATGGTCTTCTACGAAAATTCAGGATTGCAGAATCTATACGACATAGTACGATATTGTCAGTCCAAAAGACAATGCCGACGAAATGCCTTTTTCCGGCATTTTGCTGAGCCACTTCAAGACTGCAACGGAATGTGCGACAACTGTGCATTCTCAAGTGAGGTGAAGGAAGTGGATGTCACTCGCCATGCTATACTGATGGTTTCATTGTTGCAAGATCTGCAAGCAAATGATCAGAGGTCTACAATGTTGCAATTAGTCGAAAAGATGAAAGGAAAGCAAAAAGAATTAGGTGCTGAGTTGAAACGAGAGGAAATTGAGCAGCTCATCTTACAGCTTTTATTGGAGCGTGCTTTGAAAGAAGAATATCAGCATACCCCTTATGCCACAAATGCTTACATTGCTGTAGGGCCATTGGCCAAGCAAATATCACAAGGGAAGAGGGCTGTGAAGCTTGAGATTTATAGTGAACAGAAAACTAAGGCTGGAGTAAGAGTAGCGAAATGTAGCCTCGGGTCCTCCGGTTTGGAGCTAAAGCTTGACGAGCTGAGGAAAGAATTGTCTTCCATTCATGGAGGAATACTCCCACACTCCATCTTGTCCACTCAACAAATTAGCTTATTATGTTCTCAAAAACCAAACTCACTAGAACAGTTGGAGAAGGTAATTGGAAAATTGAAGACTGAAAAATATGGAAGTAGAATACTTGAGCAGATCGAAAAATATGCCGATTTTAAGCAGTCTGATGAACAAGGAACTGATGGTAGAGCTTCAAAGAGGTTGAAGACCAAGAAGAACCTTGTTCTTATTGATAGTAGTGAAGATGAAGCATGA 2106 0.4088 MESNDILEELLNIDVEIEDVQDQIRGLIERQEKLYERKSELSAILEACKDSENQINNGSGSVENWSAPFEWDSQADDLRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALIVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKFIYKALEKGEEELKVLYVTPEKISKSKRFMSKLEKCNHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLMEMLRIPRCVKFVSSVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRDRGVSADHYHADMDVNAREKVHMRWSNNKLKVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFRHFAEPLQDCNGMCDNCAFSSEVKEVDVTRHAILMVSLLQDLQANDQRSTMLQLVEKMKGKQKELGAELKREEIEQLILQLLLERALKEEYQHTPYATNAYIAVGPLAKQISQGKRAVKLEIYSEQKTKAGVRVAKCSLGSSGLELKLDELRKELSSIHGGILPHSILSTQQISLLCSQKPNSLEQLEKVIGKLKTEKYGSRILEQIEKYADFKQSDEQGTDGRASKRLKTKKNLVLIDSSEDEA* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0826 701 Coils Coil 17 37 - -
Lan18g0826 701 PANTHER DNA HELICASE RECQ FAMILY MEMBER 7 674 - -
Lan18g0826 701 CDD DEXHc_RecQ1 70 278 - -
Lan18g0826 701 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 296 445 IPR001650 -
Lan18g0826 701 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 81 517 IPR004589 GO:0004386|GO:0006310
Lan18g0826 701 SUPERFAMILY HRDC-like 603 668 IPR010997 GO:0000166|GO:0044237
Lan18g0826 701 SMART helicmild6 325 406 IPR001650 -
Lan18g0826 701 Pfam Helicase conserved C-terminal domain 302 405 IPR001650 -
Lan18g0826 701 Gene3D - 479 579 IPR036388 -
Lan18g0826 701 Gene3D - 46 278 IPR027417 -
Lan18g0826 701 Pfam DEAD/DEAH box helicase 90 258 IPR011545 GO:0003676|GO:0005524
Lan18g0826 701 Pfam HRDC domain 603 662 IPR002121 GO:0003676
Lan18g0826 701 CDD SF2_C_RecQ 279 415 - -
Lan18g0826 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 422 IPR027417 -
Lan18g0826 701 ProSiteProfiles HRDC domain profile. 594 673 IPR002121 GO:0003676
Lan18g0826 701 PANTHER ATP-DEPENDENT DNA HELICASE Q1 7 674 - -
Lan18g0826 701 Pfam RecQ zinc-binding 418 474 IPR032284 -
Lan18g0826 701 Gene3D HRDC domain 598 668 IPR044876 -
Lan18g0826 701 SMART RQC_2 483 580 IPR018982 GO:0006260|GO:0006281|GO:0043138
Lan18g0826 701 Gene3D - 279 475 IPR027417 -
Lan18g0826 701 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 96 271 IPR014001 -
Lan18g0826 701 SMART ultradead3 84 287 IPR014001 -
Lan18g0826 701 Coils Coil 511 531 - -
Lan18g0826 701 Pfam RQC domain 480 584 IPR018982 GO:0006260|GO:0006281|GO:0043138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0826 Lan-Chr18 13636438 13646041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0826 83 420 Eukaryotic Initiation Factors Gene Family AT3G19760 19.198 1.06e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0826 K10899 - gmx:100817635 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0826 18 13636438 13646041 Lan18g0826 18 13636438 13646041 ECH