Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0823 ATGTCCCTTCTCAGCAGATTCTTCTATAAGAGACCCCCAAATGGGTTACTCGAATTCATCGACAGAGTCTATGTTTTTGATTCTTGCTTCTGCACTGAAGTATTACCTGAAGGAATGTACCAACTCTACCTTCATGAAATCATCATTGAGTTGCATGAAGAGTTTCCAGAATCTTCTTTTCTCGCCTTCAATTTTAACGAAGGCGAGAAAAGAAGCCAATTCGCTGAAATTTTAGCTGAGTTCGATGTAACCGTGATGGAATATCCGAAACAGTACGAGGGTGTTCCAATTTTGCCCCTGTCTCTGGTTCAGCATTTTCTTAGGGTTTGTGAGAGCTGGCTTTCACGTGGGCACCCTCAAAATATGATTTTGTTCCATTGTGAGAGAGGGGGTTGGCCCCTTTTGGCGTTTTTGCTTTCAAGTTTATTAATTTTCAAAAGGGTTCATAGTGGTGAACGTAAAACCCTTGATATGGTTCATAGAGAGGCGCCAAAGGGTTTGTTAAAATTGTTGTCACCTTTTAACCCTTTGCCTTCTCAGCTTCGTTATCTTCAGTATGTGGCTAGACGGAACATCACACCAGAGTGGCCGCCGCCGGAGCGTGCTTTGTCGCTGGATTGTGTCATTCTAAGAGCAATTCCTAGTTTTGATGCGCAGAATGGGTGTAGACCCATGGTTAGGATTTTTGGTAGGAATTTGCATAGTAAAGGTGGGCTGAAAACTCATATGATCTATTCCATGCTCAATAAAAAGAAGTCGTTGAAGCATTACCGTCAGGCTGACTGTGATGTGATTAAGATTGACATTCAATGTTTTGTGCAAGGAGATGTGGTGTTGGAGTGTGTCCATATGGATTTGGATCTAGAGCGAGAAGTGATGATGTTTCGTGTAATGTTCAACACAGCATTTATTCGCTCCAACATATTGATGTTGAATGCTGAAAACTTGGACATTCTGTGGGATTCGAAGGAGCGGTATCCAAAAGGCTTCCGGGCTGAGGTTTTGTTTGGGGATGTTGAAAGCATAAGTCCTACAAGGGCTCCAACAGCCATATTAAACGGCGAGGAGAAAGGTGGATTGCCACTTGAAGCATTTTCAATGGTTCAAGAACTTTTTAATGGTGCAGAATGGGATGAAAGCGGTGATGCTGCCGCCTGGCTGCTTCATCAGCTTAATGTCTTAAATGATGTCAAAGAGTTTTCGAAGTTGCAAGGCAAAGGAAGTTGGTATTCATCACCTACTGACTCTGACGATGAAAATAATGAGTCAAGCACTGCTGATAGTTCAGATGATACGTTTGATGTTATTTCGAAGACTTCATCTTCTTCTTCTTCTGATCCTTCAAAATTATTGACATCTGAGATATCTGATTCAGCCCATTTAGCTTTTGATAGGGATGGTGTTAATCATGGAAGTCTCACCTCAAGAACACTTGATCAGTCATTGACTGATAATGTTTCATCACCTCATTATGCTCCTAGTAAAGAATATTCTCTTCGTTCATTTCCACCATCACCTTCACCAATTCCTGCTACTCAATCTCACCTTTCATCACCGCCACAAGCACCACCGCCTCCGCCTCCACCTCCACCATTCTCTAATAAGGAGCTTTCTCTAACCTTGTCTAATAATGCACCACCTCCTCCTCCTCCACCACCACCACCTCCTCCACCATTGTCAAACGGAGTCAATTTACTTTCTTCCCCACTACCTCCACCTCCACCACCTTTTCCTCATTCATCAACTACTAACAACAAAACCTTACCACCACCGCCTCTACTATCGATGGGTCACAATATTAGCAAGGCTTCTAAAATGCCTCCACCTCTGCCACCCTCTCCTCTAGGACGTAACATTAATAATGCTACTATCCCGACTCCACCCCCACCCCCTCCAAGACCTACGCAGCCAGGTTCAGCTCCCCCACCCCCACCTCCACCACCTCCTTCTATAAGTCGTATTGCCAACAATGCTCCTACTCCACCCCCACCTCCTCCAAGACCAGTGCAACCAGGTTCAGCTCCACCACCCCCACCTCCGCCACCTCCTTCTATAAGTTGTATTGCAAACAGTGCTCCTACTCCACCGCCACCTCCTCCAAGACCTATACAACATGGTTCAGCTCCACCACCCCCACCTCCGCCACCTCCTTCTATAAGTCGTATTGCCAACAGTGCTCCTACTCCACCGCCACCTCCTCCAAGACCTATGCAACAAGGTTCAGCGCCGCCACCCCCACCTCCGCCACCTCCTTCTGTAAGTCGTATTGCCAACAGTGCTCCTCCTCCACCCCCACCTCCTCCAAGACCTGTAAGCACAAGTTCGACCTCTCCTCCCCCCTCAGGATCTAGACAAACTGGGTCTGTCCCACCCCCTCCACTCCAACCTCCTCCAAGACCTGTAAGCACAGGTTCAGCCCTTCCCCATGGAGCTAGACAAACAGGGTCAGCTCCACCGCCTGCGCCCCCACCTCCCCCAGGATCTCGACAAACAAGTTCAGCCCCACCACCTCCACCTCCACCTCCTCCAGGTATAAGAATTGGTTCAGCTCCACCACCTCCACCTCCTCCAGGTATAAGAACTGGTTCAGCTCCACCACCTCCACCTCCAGCCCCTACAGGACCTAATCGAATGGGTTCAGCTCCACCACCACCTCCACCACCAGCACCAAGGCCTCCAGGTGCTCCTCCTCCACCACCTGGTCGTGGTGCAATGCCAGTGCCACCACCTCCACCTGCAGGAAGGGCCCCTGGTGTGCCACCACCAGGCAAAACTTCTTTAGCACCTACAAATGTTGGAAAAGGTCGTGGTATTGGTGGGACTGCTGTTGCTCCTAAAAGAACTTTGTTAAAGCCCCTGCACTGGGTGAAAGTTGCTCGAGCAGCAAAAGGGAGTCTATGGGCAGATTCACAGAAACAAGATGATGAATCAAGGGCCCCTGATATAGATATATCGGAACTTGAGAGCCTGTTTTCAGCAGTATCTATTTCTGATGCGAGCAGTACTAAAGGTGGAGGTCGACGTGGTACGAACATCAACAAACCTGTGAAAGTACAATTGGTTGACTTACGTAGAGCATATAATTGTGAAATTATGCTCTCTAAAATCAAAATTCCTTTGCAAGATATGCTTAATGCAGTTCTGGCACTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTGATCAAATTCTGTCCCACAAAGGAAGAGATGGAGATGTTGAAGAATTATACAGGGAACAAGGAAATGCTTGGGAAATGTGAACAGTTTTTTATGGAGCTAATGAAGGTTCCACGGGTAGAAGCCAAGCTAAGGGTGTTTGCTTTCAAAACCACATTTTCTTCTCAGGTGAATGATTTAAGGGTAAATTTGAATACAATCAATGATGCAACCAGAGAGGTGAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTACTCTGGGCAATGCCTTGAATCAGGGAACAGCACGGGGATCAGCAGTAGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAAAATGACGTTAATGCATTATCTGTGTAAGCTTCTCGCTGAGAAAATGGTAGAGTTGGTAGATTTTGACAAGGATCTTGTCCATTTGGAAGCCGCTTCTAGGATCCAACTAAAAGCATTGGCAGAAGAAATGCAAGCTGTGAGTAGAGGTTTAGAGAAAGTTGTGCAAGAACTCACTATTTCTGAAAATGATGGTGCTATATCTACAGGATTCCGTACGGTACTGAAGAATTTTCTTAATATTGCGGAAGCTGATGTAAGGTCACTTATATCATTGTATGCCGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACTCAAATCCTTGTTGTCTTTGTCAAGATGTTCAAGAAGTCAAGAGAAGAGAATGAGAGGCTGGCAGATGCTGAAAAAAAGAGATTAGAGAGAGAAGCCATGAAGGAAAAGACAGCGAATAACACGAATCCGAAGAAGACGGCATTCGATAGAAATGCTAAAACAAGCTAG 4080 0.4581 MSLLSRFFYKRPPNGLLEFIDRVYVFDSCFCTEVLPEGMYQLYLHEIIIELHEEFPESSFLAFNFNEGEKRSQFAEILAEFDVTVMEYPKQYEGVPILPLSLVQHFLRVCESWLSRGHPQNMILFHCERGGWPLLAFLLSSLLIFKRVHSGERKTLDMVHREAPKGLLKLLSPFNPLPSQLRYLQYVARRNITPEWPPPERALSLDCVILRAIPSFDAQNGCRPMVRIFGRNLHSKGGLKTHMIYSMLNKKKSLKHYRQADCDVIKIDIQCFVQGDVVLECVHMDLDLEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGDVESISPTRAPTAILNGEEKGGLPLEAFSMVQELFNGAEWDESGDAAAWLLHQLNVLNDVKEFSKLQGKGSWYSSPTDSDDENNESSTADSSDDTFDVISKTSSSSSSDPSKLLTSEISDSAHLAFDRDGVNHGSLTSRTLDQSLTDNVSSPHYAPSKEYSLRSFPPSPSPIPATQSHLSSPPQAPPPPPPPPPFSNKELSLTLSNNAPPPPPPPPPPPPPLSNGVNLLSSPLPPPPPPFPHSSTTNNKTLPPPPLLSMGHNISKASKMPPPLPPSPLGRNINNATIPTPPPPPPRPTQPGSAPPPPPPPPPSISRIANNAPTPPPPPPRPVQPGSAPPPPPPPPPSISCIANSAPTPPPPPPRPIQHGSAPPPPPPPPPSISRIANSAPTPPPPPPRPMQQGSAPPPPPPPPPSVSRIANSAPPPPPPPPRPVSTSSTSPPPSGSRQTGSVPPPPLQPPPRPVSTGSALPHGARQTGSAPPPAPPPPPGSRQTSSAPPPPPPPPPGIRIGSAPPPPPPPGIRTGSAPPPPPPAPTGPNRMGSAPPPPPPPAPRPPGAPPPPPGRGAMPVPPPPPAGRAPGVPPPGKTSLAPTNVGKGRGIGGTAVAPKRTLLKPLHWVKVARAAKGSLWADSQKQDDESRAPDIDISELESLFSAVSISDASSTKGGGRRGTNINKPVKVQLVDLRRAYNCEIMLSKIKIPLQDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKTTFSSQVNDLRVNLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMVELVDFDKDLVHLEAASRIQLKALAEEMQAVSRGLEKVVQELTISENDGAISTGFRTVLKNFLNIAEADVRSLISLYAEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFKKSREENERLADAEKKRLEREAMKEKTANNTNPKKTAFDRNAKTS* 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0823 1359 MobiDBLite consensus disorder prediction 1320 1359 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 426 450 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 479 494 - -
Lan18g0823 1359 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Lan18g0823 1359 Coils Coil 1221 1241 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 405 419 - -
Lan18g0823 1359 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lan18g0823 1359 SMART it6_source 519 1359 IPR015425 -
Lan18g0823 1359 Coils Coil 1315 1335 - -
Lan18g0823 1359 Gene3D - 197 342 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 1320 1342 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 479 943 - -
Lan18g0823 1359 ProSiteProfiles Formin homology-2 (FH2) domain profile. 940 1340 IPR015425 -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 815 924 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 405 450 - -
Lan18g0823 1359 PANTHER FORMIN-J 1 779 - -
Lan18g0823 1359 PANTHER FORMIN-J 865 1346 - -
Lan18g0823 1359 Gene3D Formin, FH2 domain 941 1325 IPR042201 -
Lan18g0823 1359 SMART PTEN_C2_2 198 1068 IPR014020 -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 543 580 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 784 803 - -
Lan18g0823 1359 SUPERFAMILY Formin homology 2 domain (FH2 domain) 883 1334 - -
Lan18g0823 1359 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Lan18g0823 1359 Pfam Formin Homology 2 Domain 945 1315 IPR015425 -
Lan18g0823 1359 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 517 534 - -
Lan18g0823 1359 MobiDBLite consensus disorder prediction 623 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0823 Lan-Chr18 13605903 13615429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0823 1 438 FH2 protein (formin) Gene Family AT1G31810 74.260 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0823 - - lang:109333182 1221.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0823 18 13605903 13615429 Lan18g0823 18 13605903 13615429 ECH
Lan17g0490 17 3769274 3778306 Lan18g0823 18 13605903 13615429 LSH
Lan18g0823 18 13605903 13615429 Lan6g0436 6 3639918 3648972 LSH