Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0813 ATGGAGAGGTACAACTTAATTAAGGAAGTTGGTGATGGGTCATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCATGGGAGGAGTGTGTAAATCTGAGAGAAGTCAAGTCATTACGAAAGATGAACCACCCAAATATCGTGAAGCTAAAGGAAGTTATTCGTGAAAGTGACATTCTATACTTTGTTTTTGAGTATTTGGAATGCAACCTATATCAACTTATGAAAGACAAGCAAAAACTGTTTTCTGAAGGTGAAATTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATCCACCGGAATGGATACTTCCATCGTGACATGAAGCCTGAAAACTTGCTGGTTACTAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCCCGTGAGATAAGTTCACAGCCGCCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCAGAAGTGCTCCTTCAGTCTTATCTCTATGGCTCAAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTTTCCCTCCGTCCTCTTTTTCCGGGTGTCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTTCTAGGCAGTCCAACAACTGAATCATGGGCTGATGGACTCAAACTTGCAAGAGATATTAACTATCAATTCCCACAGCTTGCTGGTGTACAACTTTCTTCATTGATCCCATCCGCCAGTGTTGATGCAATCTGCCTTATCACATCACTTTGCTCATGGGATCCTTGCAAGAGGCCAACAGCTTCAGAGGCCCTACAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTCCGCACCAGAGCGGTAGCGAGAACTCCTCCGTCAGCTGCAACCAGGGGAGCCTTGGATCAGCCAGGGGTCAAGAGATATTCGAGTGCTTTCAATAATTCAATGCTCCTCAACAATTTTACTTCCCCGAAATTACATCCTTCTTTAGCTTCAGGTGTCCAGCGGAAGCTGAATATGGTAAATCAGGATGGAATAAAGAATGATAATTCAATGAAAACTACAAAGCAATCAAAATATCGTCCACCAGGAAAGAACAGCCCAACTTCAATAAACATGGGGAGGAGTACACATGGTGTTTCAGAAACTGCTGAGAAGTTAGCCAATATGTCTGTTGGTAATCGAAGACAATCCATTGGACAACCTCGTCCTTCTCCTCCGATGAAGACTGGAGTCAATTGGATTCCGGAATCTGGAAATTACATGCTCAGGCCAACTCAACAGATTCCAAATGGAAGAACTTTCATAAGAAAAGTTGCCGGATGA 1359 0.4246 MERYNLIKEVGDGSFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYLECNLYQLMKDKQKLFSEGEIRNWCFQVFQGLAYIHRNGYFHRDMKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICSVLGSPTTESWADGLKLARDINYQFPQLAGVQLSSLIPSASVDAICLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPSAATRGALDQPGVKRYSSAFNNSMLLNNFTSPKLHPSLASGVQRKLNMVNQDGIKNDNSMKTTKQSKYRPPGKNSPTSINMGRSTHGVSETAEKLANMSVGNRRQSIGQPRPSPPMKTGVNWIPESGNYMLRPTQQIPNGRTFIRKVAG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0813 452 Gene3D Transferase(Phosphotransferase) domain 1 84 287 - -
Lan18g0813 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lan18g0813 452 PANTHER - 1 427 - -
Lan18g0813 452 CDD STKc_MAK_like 4 283 - -
Lan18g0813 452 MobiDBLite consensus disorder prediction 356 387 - -
Lan18g0813 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lan18g0813 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0813 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 427 - -
Lan18g0813 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lan18g0813 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0813 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lan18g0813 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0813 Lan-Chr18 13540189 13545290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0813 1 290 Core Cell Cycle Gene Families AT3G48750 37.584 1.96e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lan18g0813 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0813 K08829 - gmx:100810150 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0813 18 13540189 13545290 Lan18g0813 18 13540189 13545290 ECH
Lan17g0497 17 3848571 3850652 Lan18g0813 18 13540189 13545290 LSH