Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0811 ATGTTTACTTGCATATCTTGTACGAAGCAAACATCAGAAGAAAAGGAAGAAGAAGAAGAAGAACATGGCCGTGAGAGTGGCACGCCAAGAGCAACCGTCAAAAGCATCACAACGCAGATCAAGGATATGGCACTGAAGTTTTCAGGCACTTACAAGCAAGGCAAATCTTGTACAGGGTCCAGTAGTACCTACAAGAAAGGACAAAGATCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCCTATGTTGGAGGTGCAAGCTCCAGCTCAACTCCTGCCTGGGACTTTACAAGCTCCAATCATCCTGGTGGTAGTAGATATATGGGGGGATTCGGCATTGACAGAGGGCGTGACTCGGCATCATTGTCAGTCTGTGATGTGGTGTTGGAAGATGAAGGTGAAGCCAAGGAGTGGATGGCACAAGTGGAGCCAGGAGTGCATGTTACTTTTGTGTCTCTACCTAATGGGGGAAATGACCTCAAGAGAATTCGGTTCAACCGGGAGATGTTCAACAAATGGGAAGCTCAGAAATGGTGGGGCGAAAATTACGATCGCATCATGGAACTTTACAATGTGCAGAGATTCAATCAACAAGCTCTCAACACTCCTTCAAGATCTGAGTATGAGCCAAGAGATTCTTCTTACTCAAGATTGACATCTGCAAGAGAGAGCCCAATGACGTCATCGTTGAACAAGGATTGGACATCGACGAGTCACTATAAACCCTCTGCAAACAGAGGGTATAACCCTGCTGAACCTTGTAATCAAAGTGCCAGGGTAGAATTTCATGCAGGGTCATCCATGGAAGCATCAAGGACAACCACATCTTCTATAGATGAGCCTTCTATCAGCAATGCCGGTGAGGTAGAGGCTGAATGGATCGAAGAAGATGAACCTGGAGTCTACATTACAATCAGGCAACTAGCTGATAGCACAAGGGAACTTCGACGTGTGAGGTTTAGTCGAGAAAAATTTGGAGAGGTACATGCAAAGAATTGGTGGGAAGAAAATAAAGACAGAATACAAGCTCAATACCTTTGA 1050 0.4524 MFTCISCTKQTSEEKEEEEEEHGRESGTPRATVKSITTQIKDMALKFSGTYKQGKSCTGSSSTYKKGQRSYPDFDTISEGVPYPYVGGASSSSTPAWDFTSSNHPGGSRYMGGFGIDRGRDSASLSVCDVVLEDEGEAKEWMAQVEPGVHVTFVSLPNGGNDLKRIRFNREMFNKWEAQKWWGENYDRIMELYNVQRFNQQALNTPSRSEYEPRDSSYSRLTSARESPMTSSLNKDWTSTSHYKPSANRGYNPAEPCNQSARVEFHAGSSMEASRTTTSSIDEPSISNAGEVEAEWIEEDEPGVYITIRQLADSTRELRRVRFSREKFGEVHAKNWWEENKDRIQAQYL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0811 349 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 349 - -
Lan18g0811 349 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Lan18g0811 349 Pfam Transcription factor regulating root and shoot growth via Pin3 293 348 IPR013591 -
Lan18g0811 349 MobiDBLite consensus disorder prediction 204 255 - -
Lan18g0811 349 Pfam Transcription factor BRX N-terminal domain 32 57 IPR027988 -
Lan18g0811 349 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 349 IPR044532 -
Lan18g0811 349 ProSiteProfiles BRX domain profile. 294 349 IPR013591 -
Lan18g0811 349 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Lan18g0811 349 MobiDBLite consensus disorder prediction 10 28 - -
Lan18g0811 349 MobiDBLite consensus disorder prediction 204 257 - -
Lan18g0811 349 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0811 Lan-Chr18 13530044 13534175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0811 1 349 Major Intrinsic Protein MIP AT1G31880 62.117 4.28e-150 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0811 - - gmx:100785003 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0811 18 13530044 13534175 Lan18g0811 18 13530044 13534175 ECH
Lan17g0499 17 3858414 3867723 Lan18g0811 18 13530044 13534175 LSH
Lan18g0811 18 13530044 13534175 Lan6g0451 6 3763994 3770605 LSH