Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0809 ATGAGTGTTCCTAATACTCCTCCAGCTATGATGTTCGCGGCGTCGCAACCACTTTTCACGGTGGCGCAGTGGCAGGAGCTGGAGCACCAGGCTCTTATCTTCAAGTACTTGAAAGCTGGTCTCACTGTTCCCCCAGACCTCCTCGTTCCTATTCAAAAGAGCTTAGAATTGATGATGTCTCAACAAAAGCACCCATCTTTGGGTTATTACCGGAATGGGAAGAAGATAGACCCAGAACCTGGTAGATGCAGAAGAACTGATGGAAAAAAATGGAGGTGTTCAAAGGTTGCACACCCTGATTCTAAGTACTGTGACCGCCACATGATACGACGCCGTTGCCGTTCAAGAAAGCTAGTGGAATCTGAATCACAATCTTCTTCTGTTGCTACCACAGGAACCACATCAACTGTTTCTGCTGCAACTGGAACCTTCCAGAATCTTCCCTTGCACACCAATGGTACCCGTCAAGGTTTCACTATTGGGAATGGGAACAGCAACAACAGCACCATGAATATGATGGAGCCTTTGCCTCTTCCTACTGAGGTTTCCAGCAAAGAGTTGAGGTTTGGACTAAGCTCCGATACCGAGGAGCACAACTTCTTCCAGAAAGATTTGGGACCTATGAGGCATCAAGGTTATGACTTTACATTGGATACATCAGAAGACACATGGTCTCTCATGTCTCAGATTCCGCGACACCTCATTTCGGAATCAAGAAGTCGTTCTACTATGGCCAACAACTGCTTCCATCAGCAAACAATGCGAGACGCCGAGCTGTTGAACCTCTACAACGTCGGAAGGTCCAAGGAACTTGTCTTCAATGGCCAGTTAAGCTCACCAGGGTGTCTGAAGCAGGAATATCAGCCCCCTCAGTCTCTCTTCAGTGACTCTCACTTGAAGATGGATTTAAGCTCCTCTGCCATTGACTATAGGCCCATCATAGATTTTAACTGCAACTCAGATGCCAATTGA 972 0.4702 MSVPNTPPAMMFAASQPLFTVAQWQELEHQALIFKYLKAGLTVPPDLLVPIQKSLELMMSQQKHPSLGYYRNGKKIDPEPGRCRRTDGKKWRCSKVAHPDSKYCDRHMIRRRCRSRKLVESESQSSSVATTGTTSTVSAATGTFQNLPLHTNGTRQGFTIGNGNSNNSTMNMMEPLPLPTEVSSKELRFGLSSDTEEHNFFQKDLGPMRHQGYDFTLDTSEDTWSLMSQIPRHLISESRSRSTMANNCFHQQTMRDAELLNLYNVGRSKELVFNGQLSSPGCLKQEYQPPQSLFSDSHLKMDLSSSAIDYRPIIDFNCNSDAN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0809 323 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan18g0809 323 MobiDBLite consensus disorder prediction 115 134 - -
Lan18g0809 323 PANTHER GROWTH-REGULATING FACTOR 13 322 - -
Lan18g0809 323 PANTHER - 13 322 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan18g0809 323 MobiDBLite consensus disorder prediction 142 169 - -
Lan18g0809 323 Pfam WRC 78 120 IPR014977 -
Lan18g0809 323 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Lan18g0809 323 MobiDBLite consensus disorder prediction 120 134 - -
Lan18g0809 323 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan18g0809 323 Pfam QLQ 19 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0809 Lan-Chr18 13519238 13522638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0809 16 120 GRF Transcription Factor Family AT3G13960 55.856 1.49e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan18g0809 WRC 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0809 - - aprc:113868964 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0500 17 3883775 3887419 Lan18g0809 18 13519238 13522638 LSH
Lan18g0809 18 13519238 13522638 Lan6g0453 6 3784393 3785003 LSH