Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0799 ATGGCAGCTTGCACTGTTTACTCAACACAATCTCTCAACACAAGTTGCTTTATCTCAACCCCATCACACACACATTATGGCTTCCACCAAAAACAAGTAGTGTTCTACACCACAAGCAAGAGAATTAGCAACAAGAGAGGCATTAACACAATTAGCACAAGCCCATATGTGATAAAATGTGCAGGAGGTGACTCACAAACAGTGGTGATTGGTCTAGCAGCTGACTCAGGTTGTGGGAAGAGTACTTTCATGAGGAGACTAACAAGTGTGTTTGGTGGAACAGCTGAGCCACCAAAGGGTGGGAACCCTGATTCCAACACACTCATTAGTGACACCACCACAGTTATATGTTTGGATGATTATCATTCCTTGGATAGAACTGGTAGAAAAGAGAAGGGAGTTACTGCACTTGACCCAAAAGCCAATGATTTTGATCTCATGTATGAGCAAGTTAAGGCTATTAAGGATGGAATTGCTGTTCAAAAACCCATTTATAACCATGTTACTGGTCTCTTGGATCCTCCTGAGCTCATTAAACCTCCCAAAATCTTGGTTATTGAAGGTTTGCACCCAATGTATGATGCACGGGTCAGAGATCTCTTGGACTTCAGCATCTACTTAGACATTAGCAATGAAGTCAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGATGCTTATATTGATCCTCAAAAGCAATATGCAGATGCAGTAATAGAAGTGTTGCCAACACAATTGATTCCAGATGATAATGAAGGGAAGATTTTAAGAGTGAGGTTGATACAGAAAGAAGGGATTAAGAAATTCAGCCCAGTTTACTTGTTTGATGATGGCTCAACCATTTCATGGATACCATGTGGTAGGAAGCTTACATGTTCTTACCCTGGCATCAAATTTGCTTATGGACCAGAAACTTACTTTGGAAATGAGGTATCAGTTGTGGAAATGGATGGACAATTTGACAGATTAGATGAACTAATATATGTTGAGAGCCACCTAAGCAACCTGTCCTCAAAGTTCTATGGAGAGGTTACACAACAGTTGTTGAAACATACTGACTTCCCAGGTAGCAACAATGGAACAGGTCTGTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATATGAGCAGATAGTAGCTGCCAGGGCTGAAACTCCAGTAAGATCAGCTAAAGTTTAG 1242 0.409 MAACTVYSTQSLNTSCFISTPSHTHYGFHQKQVVFYTTSKRISNKRGINTISTSPYVIKCAGGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKDGIAVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGIKKFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFAYGPETYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQLLKHTDFPGSNNGTGLFQTIVGLKIRDLYEQIVAARAETPVRSAKV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0799 413 PANTHER URIDINE KINASE 6 412 - -
Lan18g0799 413 Pfam Phosphoribulokinase / Uridine kinase family 69 267 IPR006083 GO:0005524|GO:0016301
Lan18g0799 413 CDD PRK 69 357 - -
Lan18g0799 413 PRINTS Phosphoribulokinase family signature 74 91 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lan18g0799 413 PRINTS Phosphoribulokinase family signature 183 201 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lan18g0799 413 PRINTS Phosphoribulokinase family signature 218 235 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lan18g0799 413 PRINTS Phosphoribulokinase family signature 236 259 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lan18g0799 413 PANTHER PHOSPHORIBULOKINASE 6 412 - -
Lan18g0799 413 ProSitePatterns Phosphoribulokinase signature. 218 231 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lan18g0799 413 Gene3D - 64 296 IPR027417 -
Lan18g0799 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0799 Lan-Chr18 13423613 13430646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0799 121 295 PRT Gene Family AT3G27440 26.404 8.66e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0799 K00855 - jre:109008315 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0799 18 13423613 13430646 Lan18g0799 18 13423613 13430646 ECH
Lan18g0799 18 13423613 13430646 Lan6g0465 6 3860714 3863950 LSH