Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0792 ATGTTTGTGGTGCAGAATGATTTAGTCTATATTTTTGTAAGATGCTGTAATCAACGTATGGGCAACAGTGAGATGGATAAAACCCCAAAAGAGAAGGAGTCTAAGACACCTCCTCCTACGTCACAGGAGCAGTCTTCGACAACTGGTGCTGGAACATTTAATCCTGACTGGTCCAGCTTTCAGGCATATTCTCATATGCCTCCACATGGCTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACTCCACCGCATCCCTATGTTGCAATGTACCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTAATGGTATTGCTGAGGCTTCAGGAAATACTCCTGGAAGCATGGAAGTGGATGTTGTTAAGCCTCCTGACGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAAAATAATGAACATATTAAAACACGCGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCTGATTCTCAGAATGACTCTCAATTGAAATCAGGGGGCAGGCAAGATTCATATGAAGAAGAACCATCTCAAAATGGCAGTTCGGCACATGCTTCTCATAATGAGGAGCTTAATGCACCTCATACAATGGCTAACCAAACTATGTCTATTGTACCTATTTCTGCTGGTGGTGCTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTGCACCAACATCAGCCAACATTCCTGCAATGCGTGGAATGGCGCCGTCTCCTGCAGTTGCTGGAGGGGTGGTTACTGCTGGATCACGGGACAGTGTTCAGTCTCAACTTTGGCTGCAGGATGAACGAGAGCTTAAAAGACAAAGACGAAAGCAGTCTAACAGGGAGTCTGCTCGCAGATCCAGGTTGCGCAAACAGGCCGAGTGTGATGAACTAGCTCAGCGTGCTGAGGCTTTGCAAGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAGTCGAATCAGGAGTGGGTATGAGCAGCTACTCTCCGAAAATGCAGCACTAAAGGAGAGACTCGGGGAACCCTGTAACGATGATCCTGGGCATGGAAGGAATGATCAGCATGTGGATAATGACACTCAACAGAATGGGCAGACAGAGGCTGTGCAGGGTGGTCATTAG 1284 0.4642 MFVVQNDLVYIFVRCCNQRMGNSEMDKTPKEKESKTPPPTSQEQSSTTGAGTFNPDWSSFQAYSHMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSNGIAEASGNTPGSMEVDVVKPPDVKEKLPIKRSKGSLGSLNMITGKNNEHIKTRGTSANGIHSKSGESASEGTSEGSDADSQNDSQLKSGGRQDSYEEEPSQNGSSAHASHNEELNAPHTMANQTMSIVPISAGGAPGAVPGPTTNLNIGMDYWGAPTSANIPAMRGMAPSPAVAGGVVTAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALQEENASLRSEVSRIRSGYEQLLSENAALKERLGEPCNDDPGHGRNDQHVDNDTQQNGQTEAVQGGH* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0792 427 Gene3D - 327 381 - -
Lan18g0792 427 Pfam bZIP transcription factor 324 386 IPR004827 GO:0003700|GO:0006355
Lan18g0792 427 SUPERFAMILY Leucine zipper domain 327 383 IPR046347 GO:0003700|GO:0006355
Lan18g0792 427 MobiDBLite consensus disorder prediction 392 410 - -
Lan18g0792 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700|GO:0006355
Lan18g0792 427 Coils Coil 344 378 - -
Lan18g0792 427 MobiDBLite consensus disorder prediction 325 348 - -
Lan18g0792 427 MobiDBLite consensus disorder prediction 386 427 - -
Lan18g0792 427 MobiDBLite consensus disorder prediction 165 239 - -
Lan18g0792 427 Pfam G-box binding protein MFMR 20 115 IPR012900 -
Lan18g0792 427 MobiDBLite consensus disorder prediction 38 54 - -
Lan18g0792 427 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 20 427 - -
Lan18g0792 427 SMART brlzneu 324 388 IPR004827 GO:0003700|GO:0006355
Lan18g0792 427 MobiDBLite consensus disorder prediction 157 239 - -
Lan18g0792 427 MobiDBLite consensus disorder prediction 411 427 - -
Lan18g0792 427 CDD bZIP_plant_GBF1 329 376 IPR045314 GO:0003700|GO:0006355
Lan18g0792 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 389 IPR004827 GO:0003700|GO:0006355
Lan18g0792 427 PANTHER G-BOX-BINDING FACTOR 3-RELATED 20 427 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lan18g0792 427 MobiDBLite consensus disorder prediction 21 54 - -
Lan18g0792 427 Pfam Disordered region downstream of MFMR 154 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0792 Lan-Chr18 13380233 13386577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0792 20 421 bZIP Transcription Factor Family AT2G35530 61.893 3.25e-159 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan18g0792 MFMR_assoc 1.3e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0792 K09060 - gmx:778122 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0792 18 13380233 13386577 Lan18g0792 18 13380233 13386577 ECH
Lan17g0514 17 3992632 4000976 Lan18g0792 18 13380233 13386577 LSH