Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0791 ATGGCAACGACAACATCATCAAGAGAGGAAGATGAAGAAGAAGCTTTACGCTTAAAGGGTCTAGCAGAAACTAAATTCAAAAGCAATAATCTCAAATCAGCTCTTAAATATGCCCAACGAGCCCAACGCCTCGCCCCTCATCTCCCCACCATCTCCGAAACCGTCACCTCCCTCACCATCCTACGCGCCGCCGCTGGCTCTTCCACCACCACCACCACAACAACAACACCCAATTGGTATAACATCCTCGATTTAGAGCCCTTTTCCAACATCAACCTTATTCGAAAACAGTACAAGAAACTCGCTTTCATCCTCCACCCGGATAAGAACTCCTTCCTTGGATCCGATGAGGCTTTCAAGCTTGTCGGTGAGGCCTCACAGTTCCTCTCTGATAAGGTTCGGAAGCAGGAGTATGATATGAAGCTGCGGATGTTGATTCAAGAGGAGAAAGAGAATGAGAATGTGAGTGAAGAAGAAAGTGAAAATACTTTCTGGACTGTGTGTTCCACTTGCAGGCTATTGCATAAGTTTGAGAGAAGGTATGTGGGTCATAATTTGGTGTGTCCTAGCTGCAATAAGAGTTTTAAGGCTGTGGAAGAGGTTAATGATCACGGGTCGAGGCGAAATGAACAAGTGGGGTCCAAAGGTGGGAGCTTTAAGTTGAAAGAGGGTGTGGAGGTGGATGGGGGTGAGACATTGGGCGAGTTTGTGTTGAGGAGGAAATTGGAGTCAAAGGGGGTGAAAGGGAAAATGGGTAGTGAAAAAGATGGAGTTTTGACGGGTAAAGTTGGAGTTGATGAAGTGGGCAATGGGGATATGGAGAAGGAAGGTTTTTCTGAATGGGGTGGTGGGAGGTTGAGAACTGGCGGTTCGAGGAAGAGGATGAGTATGGTTGGAGAAGTGTTGGAGAGGTCAAATCCAAAAAGGATTAAGACTGGTGAAGAAACCATGACATTGGCTGAATTTCAGTCTGAGGTGAAGAAAAAGTTGCAGCAAAAGAAGGTAAAGGAAAAGGAGGAGGATGGTAACGATAGGAGGAGCAAGCCAGGGGAGAAACTCGAGGGTTCAAAAAACAATCAGGGTTCAGCAGTTGGGAAAGCAAGGAGTTTGAAGAAGAGTGTGAAGCTGCCAATCAAGGAGAAGCATCAGGTTTCTATGAAGAAAAAGGAGTTGAGACTTGAGAAGCATAAGGATTCCAGTGGTGGCAATTTGGAAAATATGGCGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGCTGAGAAGAGCTTTAAGAAAGGCCAAGTCTGGGCGGTATATGACGATGACGATGGAATGCCAAGGACTTGTGCCTTGATTGATGACTTCATTTCTGAAAATCCTTTTGAAGTTAGAATAAGTTGGTTAGATCTACAGAGCAACAGGGGTGAAACGATAATTAGTTTGAATAAAATGGGAGTTCACATACCTTGTGGAAGATTTAAAGTTACCTGGAAAACTACCATAAATTCAATAAATATATTTTCTCACTGTGTAGACTGTGACCGAGCAGCATGTGAGCTTTACAACATTTATCCCAAGAAGGGCTCGGTATGGGCACTTTATGGCGAGGCATCTGTAGACGTGGATAAAAGAAGTTTTAAAGTGGGGGGCAAGAGATGCTATGACATTGTTGTGTTTTTGACTAGTTACAGTGAGGTGAATGGTTTGAGCATGGCATATCTTGAGAAGGTTGATGGTTACAAGACAGTCTTTAAGAGACAAGAGATGGGGAGTCATGCAATTAGATTTCTTGGAAAGGATGATATGTGGTTAATTTCTCATCAGATCCCTGCACGGAAATTTCCAAGAAATGATGAGACTCCTGAACTATTGAAAGAATGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGAATTGCTTACTATTGGTGGTGTAGATGATTGA 1932 0.4358 MATTTSSREEDEEEALRLKGLAETKFKSNNLKSALKYAQRAQRLAPHLPTISETVTSLTILRAAAGSSTTTTTTTTPNWYNILDLEPFSNINLIRKQYKKLAFILHPDKNSFLGSDEAFKLVGEASQFLSDKVRKQEYDMKLRMLIQEEKENENVSEEESENTFWTVCSTCRLLHKFERRYVGHNLVCPSCNKSFKAVEEVNDHGSRRNEQVGSKGGSFKLKEGVEVDGGETLGEFVLRRKLESKGVKGKMGSEKDGVLTGKVGVDEVGNGDMEKEGFSEWGGGRLRTGGSRKRMSMVGEVLERSNPKRIKTGEETMTLAEFQSEVKKKLQQKKVKEKEEDGNDRRSKPGEKLEGSKNNQGSAVGKARSLKKSVKLPIKEKHQVSMKKKELRLEKHKDSSGGNLENMAVVDSDFYDFDKDRAEKSFKKGQVWAVYDDDDGMPRTCALIDDFISENPFEVRISWLDLQSNRGETIISLNKMGVHIPCGRFKVTWKTTINSINIFSHCVDCDRAACELYNIYPKKGSVWALYGEASVDVDKRSFKVGGKRCYDIVVFLTSYSEVNGLSMAYLEKVDGYKTVFKRQEMGSHAIRFLGKDDMWLISHQIPARKFPRNDETPELLKECWELDPASLPSELLTIGGVDD* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0791 643 PRINTS DnaJ domain signature 80 98 IPR001623 -
Lan18g0791 643 PRINTS DnaJ domain signature 98 113 IPR001623 -
Lan18g0791 643 PRINTS DnaJ domain signature 114 134 IPR001623 -
Lan18g0791 643 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 12 639 - -
Lan18g0791 643 Pfam Domain of unknown function (DUF3444) 406 610 IPR024593 -
Lan18g0791 643 PANTHER BNAC03G44070D PROTEIN 12 639 - -
Lan18g0791 643 MobiDBLite consensus disorder prediction 322 378 - -
Lan18g0791 643 Gene3D DnaJ domain 63 168 IPR036869 -
Lan18g0791 643 Coils Coil 319 340 - -
Lan18g0791 643 SMART dnaj_3 77 134 IPR001623 -
Lan18g0791 643 SUPERFAMILY Chaperone J-domain 70 143 IPR036869 -
Lan18g0791 643 MobiDBLite consensus disorder prediction 261 293 - -
Lan18g0791 643 ProSiteProfiles dnaJ domain profile. 78 142 IPR001623 -
Lan18g0791 643 CDD DnaJ 78 131 IPR001623 -
Lan18g0791 643 MobiDBLite consensus disorder prediction 326 353 - -
Lan18g0791 643 Pfam DnaJ domain 78 139 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0791 Lan-Chr18 13377935 13379981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0791 11 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.707 7.53e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan18g0791 DUF3444 5.2e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0791 - - lang:109332126 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0791 18 13377935 13379981 Lan6g0474 6 3920952 3923046 LSH