Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0781 ATGGAACTATTCCCAGCACAACCAGACTTATCATTACAAATCAGCCATCCAAACACTAAACCGACATCAAGTTGGAAGAGAAGTACAACAGATGAAGAAGTTGATTTGGGGTTTTGGAAGAGAGCTTTGGATTCTAGAAAGTCCTTATCATCTTCAATGTCCAAAACTGATGCCACTTGTTTTGACCTATCCCTCTCTTATCCAACAAGGGCTTCTTCTAACACCAACAACAATATCAACCCCTTTGAAAACAAAAACATTAATAATGCTAACACCACCAACAACAACAACATCAACAACCCTTTTCTATCATTTCATCAAAATCACTACTTTCATCAACAGCATCCACTAGTCTTCCAGCCACAACAACTACAACAGCAGCAGCACCAAAGTTTAAGCCAAGAGCTTGGATTTCTGAGACCCATAAGAGGAATTCCAGTGTACCAAAACCCTCCTCCTACTATGACATTTCCACAACTTCAACATCATCGACATCTTCTAGATGTTTCTTCCACTGCTCCTTCACCTATTTCCAACACAACCACTACATCATCTTTTCATCATTCTCAAGCTTTGATGCGGTCAAGGTTCTTGTCACGCTTCCCTGCGAAGCGAAGCATGAGGGCTCCTCGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCATGCTGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTGATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCTGCTTCTTCAGGGCATTCTGATGTCTATGATAATGGATCATCTGGAGATAATTCTGATGACATAATGTTTGACATTAACTCTTCAAGAAGATCTGATATATCCATTAAGCAGGGCAAGCCAAATGTTAATCAAGATAAAGAATATCATGGGCTCTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCAAGGCAAGCCAAAGTCTGATTCTGTTAGAAACGTGCCTTCTCTTGAGAAGAATACGGACCCAAAGTGCTTAAGCTATGAGAGAATATCAGATAGAAGCTCATCCTCAAACAATTCAGGATCAAGCCCGAAAAAGCTTAATTTGGATTTGGAATTCACCTTGGGCCAGCCACTTTGA 1173 0.4177 MELFPAQPDLSLQISHPNTKPTSSWKRSTTDEEVDLGFWKRALDSRKSLSSSMSKTDATCFDLSLSYPTRASSNTNNNINPFENKNINNANTTNNNNINNPFLSFHQNHYFHQQHPLVFQPQQLQQQQHQSLSQELGFLRPIRGIPVYQNPPPTMTFPQLQHHRHLLDVSSTAPSPISNTTTTSSFHHSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGHSDVYDNGSSGDNSDDIMFDINSSRRSDISIKQGKPNVNQDKEYHGLWSNSSREAWLQGKPKSDSVRNVPSLEKNTDPKCLSYERISDRSSSSNNSGSSPKKLNLDLEFTLGQPL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0781 390 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 389 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lan18g0781 390 MobiDBLite consensus disorder prediction 11 25 - -
Lan18g0781 390 SUPERFAMILY Homeodomain-like 207 263 IPR009057 -
Lan18g0781 390 MobiDBLite consensus disorder prediction 360 378 - -
Lan18g0781 390 Gene3D - 209 266 - -
Lan18g0781 390 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 210 263 IPR006447 GO:0003677
Lan18g0781 390 MobiDBLite consensus disorder prediction 330 347 - -
Lan18g0781 390 MobiDBLite consensus disorder prediction 330 390 - -
Lan18g0781 390 MobiDBLite consensus disorder prediction 268 294 - -
Lan18g0781 390 Pfam Myb-like DNA-binding domain 211 262 IPR001005 -
Lan18g0781 390 MobiDBLite consensus disorder prediction 1 28 - -
Lan18g0781 390 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0781 Lan-Chr18 13266037 13271493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0781 126 389 G2-like Transcription Factor Family AT4G17695 44.170 5.90e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan18g0781 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0781 - - aprc:113868756 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0781 18 13266037 13271493 Lan18g0781 18 13266037 13271493 ECH