Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0779 ATGTATGGGGATTGTCAAGTTATGTCAAATATGGGAGGAAACGTTGTAGTAAACTCAGATTCTCTCTTTTCCTCTTCGATTCAGAACTCTAACTTCAACTTCTTGCCTACCATTCCTTTTCAACCTTTTCCTCCCTTGTCTCTTACACAGAAAGAAGAAGATGGGATCTTGGCAGGGAAGGAAGAAATGGAGAGTGGTTCAGGTAGTGAACAAGTTGAAGACAAATCCGGGAATGAACAAGAGGGTGAACAACCTCCAAAGAAAAAACGTTATCACAGGCACACTGCTCTCCAGATCCAAGAAATGGAAGCTTTATTCAAGGAATGTCCACACCCAGATGATAAGCAAAGGATGAAACTGAGCCATGAGCTGGGTCTGAAACCACGCCAGGTCAAGTTCTGGTTTCAGAATCGCCGAACCCAGATGAAGGCACAACAAGATCGAGCAGATAATGTGATACTTAGAGCTGAAAATGAGAGTCTAAAGAATGATAACTATAGGCTTCAAGCAGCGCTGCGTAATATTATATGTCCCAATTGTGGTGGTCCTGGAATCATGGGAGCTGATATGGGATTGGATGAACAACAGCTTCGCCTTGAAAATGCTCGCTTAAGAGAAGAGTTAGAACGTGTGTGTTGTCTGACATCAAGATACACCGGCCGCCAAATCCAAACCATGGCACCACCACCTTCTCTTATGGACCAATCATTGGATTTAGACATGTGCATATACCCAAGACACTTCACAGATCCTATACCTTGCACACAAATGATTCCTGTACCAATGTTGCCACCTCCTGAAGCCTCATCATTCCCAGAGGGTTGTCTTTTAATGGAAGAAGAGAAGTCTCTAGCATTGGACCTTGCAGCCTCTTCCATGGATGAGCTTGTGAGGATGTGTCAGACACATGAACCACTTTGGATCCGAAACAGTGAGAATGTAATGGAAGTTCTTAATTTTGAGGAGCACGCAAGGATGTTTCCATGGCCTTTGAATCTCCAGCACCGAAGTGAAGTAAGGAGAGAAGCTAGCCGTGACAGTGCTGTGATTATAATGAATAGTGTTACTCTTGTTGATGCCTTCCTTGATGCTCAAAAATGGATGGAGCTGTTTCCAACAATGGTTTCTAGAGCAAAAACGGTGCAAATTATATCTTCTGGTGCTTCTGGTCATGCATGTGGGTCTCTTCAGTTGATGTACGCGGAGCTTCAAGTTCTTTCTCCTTTGGTGTCCACTCGTGAGACTCATTTCCTTCGATATTGTCAACAAAATGCTGAGCAGGGAACCTGGGCCATTGTTGATTTTCCGATTGATAGCTTTCATGAAAATATTCACCCTTCTTATCCTAGATACTGCAGAAGGTGCTCCGGTTGTGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACTTGGGTTGAGCATGCAGAAGTAGAAGAGAAACCAGTACATCAGATATTCAGTAACTTTGTTTATGGTGGAATGGCATTTGGAGCACAACGCTGGTTAGGAGTTTTGCAGAGACAATGTGAGAGGGTCGCAAGCCTCATGGCCAGAAATATATCAGATCTTGGAGTGATACCCTCGCCCGAAGCAAGAAAGAATTTGATGAGTCTAGCACAAAGAATGATTCGAACATTTAGCCTTAACATGAGTACCTCAAGTGGTCAATCATGGACAGCCATATCTGATTCCCCTGAAGACACGGTTAGGATCACAACTAGGAAAATCACAGAGCCCGGTCAGCCTAATGGGGTCATTCTCGGGGCCGTTTCAACCATTTGGCTGCCCTTTTCTCACACCAAGGTCTTTGATCTCCTCAGGGATGAACGCCACAGATCTCAGATGGATGCTCTTTCCAATGGGAACTCATTGAATGAAGTGGCTCATATTGCTAATGGTTCACATCCAGGAAACTGCATTTCACTTCTTCGTATAAATGTAGCAAGCAACTCATCCCAGAACGTGGAGCTTATGCTGCAAGAGAGTTGCACTGATCAATCTGGAAGCCTTGTAGTCTACACCACCATTGATGTTGATTCCATTCAGCTAGCAATGAGTGGTGAAGACCCTTCCTGCATTGCCCTTCTTCCACAAGGGTTCATGATAGTGCCAATGGACTCACCAAACATTGGTACTTCTGAACCTGTCACAGGACCTTTGCCAAATACTACTACAAGTGTCAATTCAGGGTGTCTTCTCACTGCTGGGCTTCAAGTTCTTGCAAGCACAATCCCATCTGCAAAGCTTAATCTTTCAAGCGTGACCGCAATCAACAACCACCTCTGCAACACCATGCATCAGATTGAAGCTGCTCTTTGCAGCAGCACTAACAGCTCTCATCTTGAGAATAATGGCACTTTTGTTGGATCTTGCACTGAACCCACCACTAGTGGTGCACCCCCTAAGTAG 2412 0.4453 MYGDCQVMSNMGGNVVVNSDSLFSSSIQNSNFNFLPTIPFQPFPPLSLTQKEEDGILAGKEEMESGSGSEQVEDKSGNEQEGEQPPKKKRYHRHTALQIQEMEALFKECPHPDDKQRMKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENESLKNDNYRLQAALRNIICPNCGGPGIMGADMGLDEQQLRLENARLREELERVCCLTSRYTGRQIQTMAPPPSLMDQSLDLDMCIYPRHFTDPIPCTQMIPVPMLPPPEASSFPEGCLLMEEEKSLALDLAASSMDELVRMCQTHEPLWIRNSENVMEVLNFEEHARMFPWPLNLQHRSEVRREASRDSAVIIMNSVTLVDAFLDAQKWMELFPTMVSRAKTVQIISSGASGHACGSLQLMYAELQVLSPLVSTRETHFLRYCQQNAEQGTWAIVDFPIDSFHENIHPSYPRYCRRCSGCVIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNFVYGGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMSLAQRMIRTFSLNMSTSSGQSWTAISDSPEDTVRITTRKITEPGQPNGVILGAVSTIWLPFSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFMIVPMDSPNIGTSEPVTGPLPNTTTSVNSGCLLTAGLQVLASTIPSAKLNLSSVTAINNHLCNTMHQIEAALCSSTNSSHLENNGTFVGSCTEPTTSGAPPK* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0779 803 Pfam START domain 288 512 IPR002913 GO:0008289
Lan18g0779 803 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 77 780 IPR042160 -
Lan18g0779 803 PANTHER - 77 780 - -
Lan18g0779 803 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Lan18g0779 803 MobiDBLite consensus disorder prediction 61 93 - -
Lan18g0779 803 Gene3D - 337 497 IPR023393 -
Lan18g0779 803 Gene3D - 73 156 - -
Lan18g0779 803 SUPERFAMILY Bet v1-like 548 770 - -
Lan18g0779 803 SUPERFAMILY Bet v1-like 279 514 - -
Lan18g0779 803 MobiDBLite consensus disorder prediction 61 88 - -
Lan18g0779 803 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Lan18g0779 803 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Lan18g0779 803 SUPERFAMILY Homeodomain-like 79 146 IPR009057 -
Lan18g0779 803 SMART HOX_1 86 149 IPR001356 GO:0003677
Lan18g0779 803 CDD homeodomain 88 146 IPR001356 GO:0003677
Lan18g0779 803 CDD START_ArGLABRA2_like 282 511 - -
Lan18g0779 803 SMART START_1 287 512 IPR002913 GO:0008289
Lan18g0779 803 ProSiteProfiles START domain profile. 278 515 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0779 Lan-Chr18 13209995 13216726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0779 8 776 Homeobox Transcription Factor Family AT5G46880 56.938 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan18g0779 START 1.2e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0779 - - gmx:100812829 1311.59