Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0773 ATGATGGACGGAGTTAATAGCGGTGGCGGTAACGGCGATGGTGCCACCCCGACGCCTGCTCCGGCGCCGATTCCGAACGCCAACACTCCGCCGCCGTTCCTGAGCAAAACGTACGACATGGTTGACGACCATTTAACTGATTCTATCGTGTCGTGGAGCGCAACCAATAACAGCTTCGTGGTTTGGAACCCACCGGAATTCGCAAGAGACCTTTTGCCCAAACACTTCAAGCACAACAATTTCTCAAGCTTCGTTAGACAGTTAAATACTTATGGTTTCAGGAAGGTCGATCCAGATCGCTGGGAATTTGCGAATGAGGGCTTTTTGAGGGGTCAAAAGCACTTGCTTAGGAGTATAACTAGGAGAAAACCTGCCCATGGTCATAATCAACAACAAGCTCAGCAATCGCATGCACAGAGTTCATCATCAGTTGGGGCATGTGTAGAAGTTGGTAAATTTGGGCTAGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAATGTACTCATGCAAGAACTTGTGAGGTTGAGGCAACAGCAACAAACCACTGATAACCAGCTGCAGTCTATGGTTCAGCGCCTTCAAGGAATGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAAGCTGTTCAGAGCCCTGGCTTCTTTGCTCAATTTGTACAACAGCAAAATGACAGCAACAGGCACATAACTGAAGTCAACAAAAAGCGTCGGCTCAAACAGGAAGGTATTTCTGAAACAGAGCATGCTGCTGATCCTGATGGACAAATTGTTAAATATCAACCTGTGATGAATGAGGCAGCAAAAGCAATGCTAAGGCAGATCATGGCGTGGGATACTTCTCGTGTAAAATCATTTAGCAAAAGCCCTGATAGTTACTTAATTGGTGATGGTTCACCGCCATCCAGTACATTGGACAGTAGCAGCTCTTCAAGCAGGGCTTCTGGAGTAACACTCCAAGAGGTCCCTCCAGCTTCAATGCAGTCTTCTCACATTCCTGCTTCAAAGGGGATACAAGGACACGTCCCACCTGAAAATCTATCTTCAACACAAACTGCAGCTTCTGAAAAAGTTGCGAAGGTTCGAGTGCCGGAGGCACCTTCTGTTTGTGGCCCTCAAGCAGATATGATCATGCCTGATCTTTCTCCAATAACAGGTAATATTCTTGATATTCCAGACGAAAATTTAATGTGCCCTGAGACAGGCAGCGACACATTTATGGATCCTACTTCATTTGGGGCTAGCGAGTCATTTCCCATCGACTTCGACTGTATCCCACCTGATGCAGACATTGAAGATTTGTTAGGCAATCCTGCTATTTGGGATGATTTTTTGCAAACTCCAGTGTCTGAGGATATTGAGATTGATGTGGCTGAAGTGTCCGAAGGGATTGAGGTGCATCCAACAGGAAATGGATCGAACAAAACTGAACATTTGGATCAACTTAGAGAGCAGATGGGGACTTCTTTCATCTGA 1482 0.4588 MMDGVNSGGGNGDGATPTPAPAPIPNANTPPPFLSKTYDMVDDHLTDSIVSWSATNNSFVVWNPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRSITRRKPAHGHNQQQAQQSHAQSSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQSMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRHITEVNKKRRLKQEGISETEHAADPDGQIVKYQPVMNEAAKAMLRQIMAWDTSRVKSFSKSPDSYLIGDGSPPSSTLDSSSSSSRASGVTLQEVPPASMQSSHIPASKGIQGHVPPENLSSTQTAASEKVAKVRVPEAPSVCGPQADMIMPDLSPITGNILDIPDENLMCPETGSDTFMDPTSFGASESFPIDFDCIPPDADIEDLLGNPAIWDDFLQTPVSEDIEIDVAEVSEGIEVHPTGNGSNKTEHLDQLREQMGTSFI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0773 493 MobiDBLite consensus disorder prediction 298 337 - -
Lan18g0773 493 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 461 IPR027725 -
Lan18g0773 493 MobiDBLite consensus disorder prediction 125 142 - -
Lan18g0773 493 MobiDBLite consensus disorder prediction 291 359 - -
Lan18g0773 493 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 8 461 - -
Lan18g0773 493 MobiDBLite consensus disorder prediction 123 142 - -
Lan18g0773 493 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0773 493 MobiDBLite consensus disorder prediction 344 358 - -
Lan18g0773 493 SUPERFAMILY "Winged helix" DNA-binding domain 28 122 IPR036390 -
Lan18g0773 493 MobiDBLite consensus disorder prediction 1 31 - -
Lan18g0773 493 Gene3D - 26 123 IPR036388 -
Lan18g0773 493 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0773 493 Coils Coil 152 179 - -
Lan18g0773 493 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0773 493 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0773 493 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan18g0773 493 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0773 Lan-Chr18 13176517 13180176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0773 5 489 HSF AT1G32330 54.365 6.58e-167 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lan18g0773 HSF_DNA-bind 8.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0773 K09419 - gmx:100794897 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0773 18 13176517 13180176 Lan18g0773 18 13176517 13180176 ECH