Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0772 ATGTCAGACCAGGGTACATTCTTTGGTGACTCGGTTGGGACTAATGCTAAGGATGCAGAAAGAAAAAAAGAACACAAGGTTCCCTTGTTAAAGCTGTTCTCTTTTGCTGATTTTTATGATTATGTCTTAATGGCTATTGGATCTCTTGGGGCATGTGTTCATGGTGCTTCAGTTCCTGTTTTCTTCATCTTCTTTGGAAAGTTGATCAATGTCATAGGTGTGGCTTACCTTTTCCCTAAAGAAGCTTCACATCAAGTTGCCAAGTACTCATTGGATTTTGTGTATCTAAGTATAGCAATATTGTTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGTGAAAGACAAGCAGCAAAAATGAGAATGGCTTATTTAAGGGCAATGTTGAATCAAGATATAAGCCTTTTTGATACAGAGGCATCAACAGGAGAGGTTATTTCTGCCATTACAAGTGACATTATCATTGTTCAAGATGCAATATCAGAGAAGGTTGGAAACTTCATGCATTACATAAGCAGATTCATAGCGGGATTTACTATTGGCTTTGTTAGAGTGTGGCAAATTAGTTTAGTGACACTTTCAATTGTCCCCTTGATTGCACTAGCTGGAGGTCTTTATGCATACGTCACAATTGGCCTTATTGCAAAAATTAGAAAAGCTTACGTCAGGGCTGGTGAAATTGCTGGAGAGGTGATAGGCAATATTAGAACGGTACAAGCATTTGCAGGAGAAGAGAAAGCTGTGAGATCATATAAGGCTGCTCTCATGAAAACTTACAAAAATGGTAGAAAAGCAGGTTTAGCAAAGGGTTTGGGACTAGGCTCAATGCATTGTGTCCTTTTTCTATCATGGGCATTGCTTACTTGGTTCACTAGCTTTGTTGTGCACAAGCATATTGCGAATGGCGGCGAGTCTTTCACTACCATGCTCAATGTTGTCATCTCTGGCTTGTCACTTGGACAGGCAGCACCAGATATATCTGCATTTATCCGAGCAAAGGCAGCCGCATATCCAATTTTTGAGATGATCGAGAGGGACACAGTGAGCAAAAAGGGCTCTAAAACAGGTCTCAAATTAAGCAAATTGGAGGGCCAAATCCAGTTCAAGGATGTCTGTTTCAGTTATCCATCTCGTCCCGATGTACATATCTTCAACAACCTCTGTCTTGACATTCCTGCAGGGAAAATCGTAGCCCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACTGTTATATCATTGATCGAACGCTTCTATGAACCCCTTTCTGGTCAGATACTATTCGATAGGAATGATATTAGGGAGCTTGATCTCAATTGGATAAGGCATCAAATTGGACTAGTTAATCAAGAACCTGCCCTTTTTGCGACAAGCATCAAAGAGAACATACTGTATGGAAAAGATGATGCCACACTTGAAGAACTAAAACGTGCCGTGAAGCTTTCAGATGCTCAATCTTTTATTAATAATCTTCCTGATAGATTAGAAACTCAGGTTGGGGAGAGAGGGATACAACTATCAGGCGGACAAAAACAACGGATTGCAATATCTCGCGCTATAGTGAAGAATCCATCAATTCTTTTGTTGGATGAAGCAACCAGCGCTCTGGATGCTGAGTCAGAGAAGAGTGTACAGGAGGCTATTGATCGCGTCATGGTTGGTAGAACAACTGTGGTAGTGGCACATAGACTTTCTACCATTAGGAATGCAGATATGATCGCAGTTGTTCAGGGAGGGAGGATTGTGGAAACTGGCAACCATGAAGAACTCATTTCCAACCCAACTAGTGTATATGCATCTCTTGTTCAAATCCAGGAAGCAACTTCTGTGCAAAGCCACCCTTCAGTTGGTCCTACCTTGGGACAACAATCAAGTATAAAATATTCAAGAGAATTATCCCGTACAACAAGTGTTGGTGCTAGTTTTCGATCAGATAAAGAATCTGTTGGCCGGGTTGGTACAGATGAGGTAGAAAATTCAAGCAAGTTGAGACATGTTTCGGCAAGAAGGCTATATTCTATGGTTGGTCCTGACTGGTATTATGGGGTTGTTGGGACATTATGTGCATTTGTTGCTGGGGCACAGATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCATACTATATGGACTGGGATACAACACGTCATGAAGTCAAAAAAATTGCACTTCTTTTCTGTGGAGCAGCAGTTATAACTATCACTGTACATGCCATTGAACATCTTTCTTTTGGAATCATGGGGGAGCGACTTACCCTTCGTGTGAGAGAAAAGATGTTTTCAGCTATTTTGAAGAATGAAATTGGCTGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCATCGCGTTTAGAGACTGATGCAACCTTATTACGAACTATAGTTGTTGATCGTTCTACAATTCTATTACAGAATGTCGGCCTGGTTGTTGCTTCATTTATTATTGCCTTCATCTTAAACTGGAGAGTAACACTTGTTGTCATAGCCACATATCCTTTGGTCATTAGTGGTCACATCAGTGAGAAACTTTTCATGAAAGGTTATGGTGGCAACTTGAGCAAAGCATATTTAAAAGCAAACATGCTGGCTGGGGAGGCTGTGAGCAATATGCGCACTGTTGCCGCATTTTGTTCTGAGGAAAAGGTCCTTGACCTTTATGCTAATGAGCTTGTTGATCCTTCGAAACGATCATTTCAACGGGGCCAAATTGCTGGCTTATTCTATGGCATTTCTCAGTTCTTTGTTTTCTCATCTTATGGCCTAGCTTTGTGGTACGGATCTGTTTTGATGGGAAAGGAGCTTGCTAGCTTTAAATCGGTTATGAAGTCGTTTATGGTTTTAATTGTAACAGCTTTGGCTATGGGGGAAACTTTGGCCCTGGCCCCAGACCTTTTGAAAGGGAATCAAATGGTTGCATCAGTTTTTGAAGTGATGGACAGAAAGTCAGGAATAACAGGTGATGCTGGAGAAGAATTGAAGACAGTGGAAGGAACAATTGAGCTCAAAAGAATCCAGTTCAGCTACCCTTCAAGGCCAGATGTGATTATTTTCAAGGATTTCAATCTAACAGTTCCTTCAAGCAAGAGTGTTGCCTTAGTCGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCCCTTATACTCAGGTTTTACGATCCAGCATCCGGGAGAGTGTTAATTGATGGAAAAGACATCAGGAGACTCAATCTGAAATCTCTAAGGAAGCACATTGGTCTTGTGCAACAAGAACCGGCTCTTTTCGCAACATCAATCTACGAAAACATTCTTTATGGAAAAGAAGGAGCTTCAGACTCGGAAGTTATTGAAGCAGCCAAACTTGCCAATGCTCATACCTTTATAAGTGCTCTTCCAGAGGGTTACTCCACCAAAGTTGGTGAAAGAGGAGTGCAACTATCAGGTGGACAAAGACAAAGGGTGGCCATTGCCAGAGCTGTTCTAAAGAACCCTGAAATCTTGCTCCTAGATGAAGCCACAAGTGCACTGGATGTGGAATCAGAGCGCGTTGTACAACAAGCTTTGGACAGATTAATGCAGAACAGAACAACAGTTATGGTGGCACATAGACTATCAACTATAAGAAATGCAGACCAAATCTCAGTTTTAAAGGATGGGAAGATTATTGATCAAGGAACTCATTCAAGTCTTATGGAGAATAAAAATGGACCATACTTTAAACTAGTCAACCTTCAACAACAGCATCAAGTATAG 3741 0.413 MSDQGTFFGDSVGTNAKDAERKKEHKVPLLKLFSFADFYDYVLMAIGSLGACVHGASVPVFFIFFGKLINVIGVAYLFPKEASHQVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRAMLNQDISLFDTEASTGEVISAITSDIIIVQDAISEKVGNFMHYISRFIAGFTIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKIRKAYVRAGEIAGEVIGNIRTVQAFAGEEKAVRSYKAALMKTYKNGRKAGLAKGLGLGSMHCVLFLSWALLTWFTSFVVHKHIANGGESFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTVSKKGSKTGLKLSKLEGQIQFKDVCFSYPSRPDVHIFNNLCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGQILFDRNDIRELDLNWIRHQIGLVNQEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFINNLPDRLETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEAIDRVMVGRTTVVVAHRLSTIRNADMIAVVQGGRIVETGNHEELISNPTSVYASLVQIQEATSVQSHPSVGPTLGQQSSIKYSRELSRTTSVGASFRSDKESVGRVGTDEVENSSKLRHVSARRLYSMVGPDWYYGVVGTLCAFVAGAQMPLFALGISHALVSYYMDWDTTRHEVKKIALLFCGAAVITITVHAIEHLSFGIMGERLTLRVREKMFSAILKNEIGWFDDTNNTSSMLSSRLETDATLLRTIVVDRSTILLQNVGLVVASFIIAFILNWRVTLVVIATYPLVISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNMRTVAAFCSEEKVLDLYANELVDPSKRSFQRGQIAGLFYGISQFFVFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSGITGDAGEELKTVEGTIELKRIQFSYPSRPDVIIFKDFNLTVPSSKSVALVGQSGSGKSSVISLILRFYDPASGRVLIDGKDIRRLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHTFISALPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLKDGKIIDQGTHSSLMENKNGPYFKLVNLQQQHQV* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0772 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan18g0772 1246 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 20 1243 - -
Lan18g0772 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 604 IPR003439 GO:0005524
Lan18g0772 1246 Pfam ABC transporter transmembrane region 46 316 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan18g0772 1246 Pfam ABC transporter transmembrane region 685 956 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan18g0772 1246 Gene3D ABC transporter type 1, transmembrane domain 31 972 IPR036640 GO:0005524|GO:0016021
Lan18g0772 1246 Pfam ABC transporter 387 535 IPR003439 GO:0005524
Lan18g0772 1246 Pfam ABC transporter 1022 1170 IPR003439 GO:0005524
Lan18g0772 1246 ProSitePatterns ABC transporters family signature. 507 521 IPR017871 GO:0005524
Lan18g0772 1246 SUPERFAMILY ABC transporter transmembrane region 670 984 IPR036640 GO:0005524|GO:0016021
Lan18g0772 1246 CDD ABC_MTABC3_MDL1_MDL2 1003 1241 - -
Lan18g0772 1246 Gene3D - 358 607 IPR027417 -
Lan18g0772 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 684 970 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan18g0772 1246 Gene3D - 993 1246 IPR027417 -
Lan18g0772 1246 CDD ABC_6TM_Pgp_ABCB1_D2_like 673 988 - -
Lan18g0772 1246 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 341 - -
Lan18g0772 1246 SMART AAA_5 395 587 IPR003593 -
Lan18g0772 1246 SMART AAA_5 1030 1216 IPR003593 -
Lan18g0772 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1003 1239 IPR003439 GO:0005524
Lan18g0772 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 606 IPR027417 -
Lan18g0772 1246 CDD ABC_MTABC3_MDL1_MDL2 368 606 - -
Lan18g0772 1246 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 20 1243 IPR039421 -
Lan18g0772 1246 SUPERFAMILY ABC transporter transmembrane region 32 338 IPR036640 GO:0005524|GO:0016021
Lan18g0772 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 996 1241 IPR027417 -
Lan18g0772 1246 ProSitePatterns ABC transporters family signature. 1142 1156 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0772 Lan-Chr18 13152691 13163345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0772 39 628 Calmodulin-binding Proteins AT2G36910 39.298 2.29e-116 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0772 K05658 - gmx:100810688 2184.07