Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0766 ATGTCTTCATCAAAACCAGATGATTCTGAATCTCCACCATCTTCATCATATAACAGCCCACCAACGCTTATAGCTCTTGCCCTAGCCTTGGTTGTTGTGTGTTTTGTTGGTTTCAGCATTGTCTATTTCTGCAGGTGTTATTTAACTAGCATTTTCAATGCTTGGGCCATTCAACGTTCAACCTCACTTGGTGGTTCCCTTGTTAACAATGTTTCTTCTTCTCCCAATAGAGGTCTTGACCCTTCTGTTCTTCACACTTTCCCTACATTTCCGTATTCATCTGTTAAGGATCTTAGAAAAGAGAAGTATAGCCTCGAATGCGCAATATGTTTGCTTGAATTCGAAGATGATAGCGTGCTGCGCTTGTTAACCGTTTGTTGCCATGTTTTTCATCAAGAATGCATTGACCTATGGCTTTGTTCTAACAAGACATGCCCAGTTTGCCGCAAAGAACTTGATTCAGCAATCGTCGAGGTGCGAAATTCTCAGGAGCGAGGTGAGGATAATGCTGCTGATGTTGAACAAGAGAGGAGGGGTGATGTGTGCATTGATGTAAAAGAAGGCGAAGATCATCTTCGACATAGTGACAATGATGATAATGATAATAATGAAACAATTCCTTCGAGTAGGAATGCGCAAACACGTGGAGAACACATGTTTACGAAGTCACACTCGACCGGGCATTCTATAGTTATGATTAGAGGAGAAGATGAAGGAAATGATAATGACAAATATAAGTTGAGATTGCCAGAGCATGTAGCAGTATTAAAAATTATAGGAGGTGGTGGCCACAACCATTCAAAGAGTTGTTCAAGTTACAAGGATGTGACAAGGCATGTTGCACCTTGTAGTAATTGTGGTTATGTTGAAACTGTATCTGGTTGCTCTTCTAGTAAAGGGTAA 903 0.4075 MSSSKPDDSESPPSSSYNSPPTLIALALALVVVCFVGFSIVYFCRCYLTSIFNAWAIQRSTSLGGSLVNNVSSSPNRGLDPSVLHTFPTFPYSSVKDLRKEKYSLECAICLLEFEDDSVLRLLTVCCHVFHQECIDLWLCSNKTCPVCRKELDSAIVEVRNSQERGEDNAADVEQERRGDVCIDVKEGEDHLRHSDNDDNDNNETIPSSRNAQTRGEHMFTKSHSTGHSIVMIRGEDEGNDNDKYKLRLPEHVAVLKIIGGGGHNHSKSCSSYKDVTRHVAPCSNCGYVETVSGCSSSKG* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0766 300 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lan18g0766 300 PANTHER RING-H2 FINGER PROTEIN ATL29 4 276 - -
Lan18g0766 300 Pfam Ring finger domain 106 149 IPR001841 -
Lan18g0766 300 SMART ring_2 107 148 IPR001841 -
Lan18g0766 300 PANTHER RING FINGER DOMAIN-CONTAINING 4 276 - -
Lan18g0766 300 CDD RING-H2_EL5_like 106 149 - -
Lan18g0766 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
Lan18g0766 300 SUPERFAMILY RING/U-box 106 154 - -
Lan18g0766 300 MobiDBLite consensus disorder prediction 191 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0766 Lan-Chr18 13112494 13113396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0766 1 279 C3H Transcription Factor Family AT2G35420 32.740 1.20e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0766 - - gmx:100815505 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0766 18 13112494 13113396 Lan6g0494 6 4139566 4140465 LSH