Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0763 ATGGGTGCAGGAGGACCTGATGATGATGATGATAATAGGTGGCCACCATGGTTGAAGCCACTGCTGAAAGAGACTTTCTTTGTTCAATGCAAGCAGCATGCTGATTCTCACAAGAGTGAATGTAACATGTATTGTTTGGATTGTATGAATGGTGCTCTCTGTTCTCTCTGCCTTAACCATCACAAGGAACATCGTGCTATTCAGATTAGGAGGTCCTCTTACCATGATGTGATTAGGGTCAATGAGATTCAGAAGGTGTTGGACATAACTGGTGTCCAGACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAACCAAGGCCTGGAAAAGGTGTCACAAACACATGTGAAGTCTGTGAACGTAGCCTTCTTGATTCTTACCGCTTTTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAATTTCCAGAAGAGAAAGCACATAGCAACAATGGCATCAGATTCTGAAGATTCATACTGTAGCAGCAGCAGCCATGGCAGACACATAATCTCTAAGGTCCAGAGTTTCACACCATCTACACCACCACCAACTTCAGTCAATTACAGAACAGCCAAAAGAAGAAAAGGAATACCACACCGTGCTCCAATGGGAGGACTAATCATACAATATTAG 651 0.4316 MGAGGPDDDDDNRWPPWLKPLLKETFFVQCKQHADSHKSECNMYCLDCMNGALCSLCLNHHKEHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNFQKRKHIATMASDSEDSYCSSSSHGRHIISKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIQY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0763 216 MobiDBLite consensus disorder prediction 180 205 - -
Lan18g0763 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 212 - -
Lan18g0763 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 212 - -
Lan18g0763 216 Pfam PLATZ transcription factor 70 141 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0763 Lan-Chr18 13086189 13088708 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan18g0763 PLATZ 5.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0763 - - vra:106774881 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0763 18 13086189 13088708 Lan18g0763 18 13086189 13088708 ECH
Lan17g0530 17 4151660 4154112 Lan18g0763 18 13086189 13088708 LSH
Lan18g0763 18 13086189 13088708 Lan6g0499 6 4178462 4180712 LSH