Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0758 ATGGCCTCTTCGGACCCCTTCACCGACAAGAACATCGTGTTCCGTAAGCTCAAGGCAAAATCTGAAAATAAGATGTGTTTTGATTGCAATGCAAAGAACCCAACTTGGGCTTCTGTGACATATGGGATCTTCCTCTGCATCGATTGTTCTGCTGTTCATCGCAGTCTCGGCGTTCACATCAGCTTTGTCAGATCTACAAATTTAGACTCATGGAGTCGTGAGCAACTAAAAACGATGAGCTTTGGAGGAAACAATCGTGCACAGGTTTTCTTTAAACAGCATGGTTGGACTGATGGTGGTAAAATAGAGGCCAAATATACATCGAGAGCTGCAGAATTATATAAACAAATACTTTCTAAGGAAGTAGCTAAAAGTATGACTGAGGAAGCAAGTTTACCATCATCTGTTGTTGCTTCTCAGTCTGCACAAGTGGCTAATGGATTTCCGGAAGTAAGGACCAATGAATCACCAAAAGAAAATAGTCTGGGGAAGACTGAAACGTCTGAGAGCACTTCTTCACCTAGGGCTTCACATACAACATTTTCCAGTACTGTAAAGAAATCTATTGGTGCTAAAAAAACTGGGAAGACTGGGGGACTTGGTGCCCGGAAGCTCGCTAAAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCAGAAGAACTACCTGCTCCAGTTTCTTCCTCAGCAAACGAAAATTTGCCTACTGGGCCATCACCGCCATCTCGCTTTGGGTATGTAGAAAATGTCCAGTCAGCTGATTTGAATTCTGGAGCTGGGGATACAAATGTGCTTGGTCATGTGTCCATACCAAAGTCATCAAGCTTCTTTGCAGACTTTGGAATGGATAGTGGTTTTCCAAAGAAGACCGTATCAAATTCCTCAAAAGTGCAAATTCAAGAATCTGATGAAGCAAGGAAGAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATTTTTTGGAGATCAGAACAAAGCTGAAGATTTGGCAGCTCAAGCTACTTTATCAAAGTTTTCAGGTAAAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGATTCAGACTCCTCCATTGATCTTGCTGCTAGTGACCTCATCAATCGAATATCATTCCAGGCACAAGAAGATATTTCATCCCTTAAAAACATTGCTGGAGAGACTGGGAAGAGGCTCAGCTCCTTTGCCTCCACTTTCATTACAGATCTTCAAGACCGAATACTCTAA 1221 0.4226 MASSDPFTDKNIVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSREQLKTMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILSKEVAKSMTEEASLPSSVVASQSAQVANGFPEVRTNESPKENSLGKTETSESTSSPRASHTTFSSTVKKSIGAKKTGKTGGLGARKLAKKPSESLYEQKPEELPAPVSSSANENLPTGPSPPSRFGYVENVQSADLNSGAGDTNVLGHVSIPKSSSFFADFGMDSGFPKKTVSNSSKVQIQESDEARKKFSNAKSISSSQFFGDQNKAEDLAAQATLSKFSGKSAISSADLFGDSDSSIDLAASDLINRISFQAQEDISSLKNIAGETGKRLSSFASTFITDLQDRIL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0758 406 MobiDBLite consensus disorder prediction 146 243 - -
Lan18g0758 406 MobiDBLite consensus disorder prediction 146 190 - -
Lan18g0758 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 406 - -
Lan18g0758 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 406 - -
Lan18g0758 406 SMART arf_gap_3 11 127 IPR001164 GO:0005096
Lan18g0758 406 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Lan18g0758 406 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Lan18g0758 406 PRINTS HIV Rev interacting protein signature 63 84 IPR001164 GO:0005096
Lan18g0758 406 Pfam Putative GTPase activating protein for Arf 13 111 IPR001164 GO:0005096
Lan18g0758 406 SUPERFAMILY ArfGap/RecO-like zinc finger 13 126 IPR037278 -
Lan18g0758 406 MobiDBLite consensus disorder prediction 223 237 - -
Lan18g0758 406 CDD ArfGap_ArfGap2_3_like 9 124 - -
Lan18g0758 406 Gene3D Arf GTPase activating protein 3 142 IPR038508 -
Lan18g0758 406 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0758 Lan-Chr18 13020627 13025254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0758 14 92 C2H2 Transcription Factor Family AT4G21160 46.250 9.77e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0758 K12493 K11855 gmx:100785169 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0758 18 13020627 13025254 Lan18g0758 18 13020627 13025254 ECH
Lan17g0534 17 4219544 4225553 Lan18g0758 18 13020627 13025254 LSH
Lan18g0758 18 13020627 13025254 Lan6g0502 6 4213018 4218145 LSH