Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0735 ATGGCGTTGAAGGAAAATCACAAAAAAGAGAACTTTTCAAGCGATGATGATTCATCTCCAAGAGGGGTATTTGAGACCCCTGTTTCAGGAACAGAGTCAGACAACAGTGGAAGCAGCAGTGACCGTTGCGTTTTTCCATCGGAATGTTCGCCGCCGGCGGAAACGGCGGATACACGGCGAGTGGGTGGATTTGAAGGGCACATGCAGCAATGGAAGTCAATGATTGACGTTTTGACGTTTAAGTCTGTTAGAAAATTTACGGCTTTTCCTATGCTTTCAGCGAACCATGATGTTTCGAAGAAAGGGTCGACGAAGAAACTTGCTCGTATTCGAAGCGCAGAAGATACAATAGATATTGGAGCTATTCCTACGAAGCCTTCTTGGAGAAACTTTGATTATGCAGAGCTTGCAGCTGCTACTAACGATTTCAGTGACGAGAACATGATTGGGAAAGGTGGCCATGCTGAAGTGTACAGGGGATGCCTACCAGATGGCCAAGTTGTAGCAGTGAAGAGGCTAATGAAGAATGAAAAGGATCCTGGGGATAGAGCTGGTGATTTCTTATCGGAGCTCGGGATTATTGCACACATAAACCACTATAATGCAACACACCTTGTTGGTTTTGGAGTAGAGCGTGGCCTCTACTTTGTCCTACAATTTGCTCCACATGGCAGCCTCTCTTCTGTGCTTTTTGGTTCTGAATGCTTTGAGTGGAAGAAAAGGTTCAAGGTAGCTATTGGGGTAGCAGAAGGGTTATTGTATCTCCATCAAGATTGCCCAAGAAGAATCATTCATAGAGACATTAAGGCCTCAAACATATTACTCAACGACAATTATGAAGCTGAGATTTCAGATTTTGGACTAGCAAAGTGGCTCCCGGGTAAGTGGTCTCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGAGTTGTGGATGAGAAGACTGATGTATTCGCGTTTGGGGTATTGCTGTTGGAGCTTATAACAGGCCGCCGAGCAGTTGATTCTGATAGTAGGCAAAGTCTTGTGATCTGGGCCAAGCCACTGCTTGAAACAAACAACATCAAAGAAATAGCAGACCCCAGGTTAGAAGAGGAATATGATCCTACTGAAATGAACCATGTCATGGTAACAGCTTCTATGTGTATCCACCATGTATCCTCGATGCGACCATACATGAATCACGTTGTGAAGTTGCTGAAGGGTGAAACACCTATAGAGCTCAGACAGAGTTCAGGCCAATCAAAATCACTATTGTTAGAGGCATGTGACCTTGAAGATTATACTTGTTCTAATTACTTGAAGGACCTAAACCGCCATAAGCAATTACTCATGGAGTGA 1371 0.4427 MALKENHKKENFSSDDDSSPRGVFETPVSGTESDNSGSSSDRCVFPSECSPPAETADTRRVGGFEGHMQQWKSMIDVLTFKSVRKFTAFPMLSANHDVSKKGSTKKLARIRSAEDTIDIGAIPTKPSWRNFDYAELAAATNDFSDENMIGKGGHAEVYRGCLPDGQVVAVKRLMKNEKDPGDRAGDFLSELGIIAHINHYNATHLVGFGVERGLYFVLQFAPHGSLSSVLFGSECFEWKKRFKVAIGVAEGLLYLHQDCPRRIIHRDIKASNILLNDNYEAEISDFGLAKWLPGKWSHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLELITGRRAVDSDSRQSLVIWAKPLLETNNIKEIADPRLEEEYDPTEMNHVMVTASMCIHHVSSMRPYMNHVVKLLKGETPIELRQSSGQSKSLLLEACDLEDYTCSNYLKDLNRHKQLLME* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0735 456 ProSiteProfiles Protein kinase domain profile. 143 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0735 456 Gene3D Phosphorylase Kinase; domain 1 103 218 - -
Lan18g0735 456 Gene3D Transferase(Phosphotransferase) domain 1 222 427 - -
Lan18g0735 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Lan18g0735 456 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 4 456 - -
Lan18g0735 456 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Lan18g0735 456 MobiDBLite consensus disorder prediction 1 58 - -
Lan18g0735 456 SUPERFAMILY Protein kinase-like (PK-like) 127 423 IPR011009 -
Lan18g0735 456 Pfam Protein kinase domain 144 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0735 456 PANTHER OS08G0249100 PROTEIN 4 456 - -
Lan18g0735 456 MobiDBLite consensus disorder prediction 1 16 - -
Lan18g0735 456 SMART serkin_6 143 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0735 456 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0735 Lan-Chr18 12707961 12712991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0735 109 413 Trihelix Transcription Factor Family AT1G70460 43.849 6.09e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan18g0735 Pkinase 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0735 - - gmx:100818314 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0735 18 12707961 12712991 Lan6g0535 6 4673240 4679484 LSH