Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0734 ATGGATCGTTCTACTTCCTCTAACTGGCTATCGTTTTCACTGTCCCCCATGGAAATGCTTAGGTCCTCCCAACCTCAGTTCATTCAATACGACACCGCTTCAGCTACCACTCCCTCTCACTACTTTCTCGATAACAACTATGCCAATGGGTGGGGGAATCAAAAGTCTCAGGTACTATACGGTGTTCAAATGGAGCAAAACGATTGTAACAAGGGACAAGCACCGCCACAAAGCATGGCGGAGCTACCGTCCTCTCTAAACAATCCACCACCTCAAGCGGTGCCGAAACTAGAGGACTTTTTTGCAGATTCTTCATCCTCCATGATGCGTTACTCAGATAGCCAAACGGAGACTCAAGACTCCTCCCTTACCCACATGGGCCACATCTGCGAACACGGTGGCTCCGCCGCTTACTTCGGCGGCAACGACCACCAAGATCTGAAAGCCATTGCTGGCTTCCAAGCTTTCTCCACCAACTCAGGTTCCGAGGTGGATGATTCTGGTTCTATCGGAAAATCTCAACCCACTTGTAACGAGTTTGGAACTCATTCCATTGAGTCCTCCGCACATGAGTTGGCCTTTTCAGTTAACTGTGGCGGCGCCAATGGTACTTTGTCGCTTGGCGTCGCCCAAAGCTCTGAAAAGGCCATAGTTGCTGCTGATTCGGATAGCACTAAGAAGATTGCCGATACCTTTGGCCAGCGAACTTCAATCTATAGAGGAGTAACTAGACACAGATGGACGGGTAGATATGAAGCGCATCTTTGGGATAACAGCTGTAGAAGGGAGGGTCAGGCCAGAAAAGGGCGTCAAGTGTACTTGGGTGGATATGACAAGGAAGAGAAAGCTGCTAGAGCTTATGATTTGGCAGCTCTAAAGTATTGGGGTCCCACTGCTACCACCAACTTCCCTATTTCGAATTATTCAAAGGAAGTGGAGGAGATGCAACATGTAACAAAGCAAGAGTTTATTGCATCACTTCGAAGGAAAAGTAGCGGTTTCTCCAGGGGAGCTTCAATATACCGGGGCGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGGATTGGCCGTGTTGCCGGAAACAAAGATCTATACTTGGGAACATTTGCAACTGAAGAGGAAGCAGCAGAGGCATATGACATTGCAGCTATAAAGTTTAGAGGCGCAAACGCCGTAACCAACTTTGAGATGAACAGATATGATGTGGAAGCTATAATGAATAGTTCACTTCCCGTTGGCGGGGCTGCAAAACGCTTGAAGCTTTCCCTAGAATCAGAGCAGAAACAACAATCCTTGAGCAATGCTCAGCAGCATCAGCATCAGCAACAACCCCACTGTGGAAACATGAATAACAGCATCGATTTCTCAGCAATTCATCAGCCAATTGCTTCAATCCCTTATGGGGTTCCGTACGATTCATCGACTGAATATTATCACCACAACCTCTTTCACCATTTTTATCCTAATGCCAATGCTGGCACAGCAGAATCTGTAGTAACTTCTACCGGTGCGAATGGATTGAATGCACTGCCAGCATCTGCTGCACCCGAGTTCTATATTTGGCCTCATCAGTCATATTGA 1587 0.4739 MDRSTSSNWLSFSLSPMEMLRSSQPQFIQYDTASATTPSHYFLDNNYANGWGNQKSQVLYGVQMEQNDCNKGQAPPQSMAELPSSLNNPPPQAVPKLEDFFADSSSSMMRYSDSQTETQDSSLTHMGHICEHGGSAAYFGGNDHQDLKAIAGFQAFSTNSGSEVDDSGSIGKSQPTCNEFGTHSIESSAHELAFSVNCGGANGTLSLGVAQSSEKAIVAADSDSTKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPISNYSKEVEEMQHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMNSSLPVGGAAKRLKLSLESEQKQQSLSNAQQHQHQQQPHCGNMNNSIDFSAIHQPIASIPYGVPYDSSTEYYHHNLFHHFYPNANAGTAESVVTSTGANGLNALPASAAPEFYIWPHQSY* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0734 528 CDD AP2 237 306 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 7 525 - -
Lan18g0734 528 ProSiteProfiles AP2/ERF domain profile. 340 398 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 PRINTS Ethylene responsive element binding protein signature 380 400 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 SUPERFAMILY DNA-binding domain 339 399 IPR016177 GO:0003677
Lan18g0734 528 Gene3D AP2/ERF domain 340 400 IPR036955 GO:0003700|GO:0006355
Lan18g0734 528 Gene3D AP2/ERF domain 238 306 IPR036955 GO:0003700|GO:0006355
Lan18g0734 528 SMART rav1_2 340 404 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 SMART rav1_2 238 310 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 CDD AP2 339 398 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 525 - -
Lan18g0734 528 MobiDBLite consensus disorder prediction 427 452 - -
Lan18g0734 528 ProSiteProfiles AP2/ERF domain profile. 238 304 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 SUPERFAMILY DNA-binding domain 237 306 IPR016177 GO:0003677
Lan18g0734 528 Pfam AP2 domain 238 296 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 Pfam AP2 domain 340 390 IPR001471 GO:0003700|GO:0006355
Lan18g0734 528 MobiDBLite consensus disorder prediction 425 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0734 Lan-Chr18 12699501 12704535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0734 94 528 AP2-EREBP Transcription Factor Family AT5G10510 59.082 2.52e-165 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lan18g0734 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0734 K09285 - gmx:100777168 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0565 17 4626378 4631589 Lan18g0734 18 12699501 12704535 LSH