Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0729 ATGGATACAGGACCCGGATCCGAACCCGAAAACCTAATTGCTGCATGCACCACCATGCTCGCCTATCGCCGCTTCTCCACCTGCCGCGACTTCGCCACCCTGATCCCTAGGCCCGACCCGAACATCTCCGCCTCCCTCGAAAAAATCCTCGCCATCACCGACATCCTCTCCACCGTCGAACACCGCCTCCCCAACAACTTACCCGACTACTACTCCATCCTTATGCTCCGCCGCGAAGACGCCGCCTACGATCGCGACCTCGTCACTCGGCAGTTCAAGAAGCTTGCTCTCCTCCTTGACCCCACCGCCGCAAACGAATTCCCATCCTCCGATGAAGCACTCACGTGCGTCCGAGAGGCCTGGCACGTGCTCTCTGACACAAAAAGACGCGACCTTTACCATGCCCAAATTGGTTATCAATCCGCTAATGCAACTTTCTGGACCACGTGCCCGTACTGTTGGAACCTTTTTGAGTACGAGAGTAAGTACGAGGATTGCACTTTGTTGTGCCAGAGTTGCCGGAAGAATTTTCATGGCGTGGCGGTTACTGCTCCGGTGAAGGATGATGATCAGAAGAACGAGTACTATTGGTGTAAAACAAGTGTGCCCTTGATGTATAGAGAGAAGGAAGATATCAACAACAATGAGAACATGATGATGGGTGGTGGTGGTGAAAGATTGGGGTAG 687 0.5342 MDTGPGSEPENLIAACTTMLAYRRFSTCRDFATLIPRPDPNISASLEKILAITDILSTVEHRLPNNLPDYYSILMLRREDAAYDRDLVTRQFKKLALLLDPTAANEFPSSDEALTCVREAWHVLSDTKRRDLYHAQIGYQSANATFWTTCPYCWNLFEYESKYEDCTLLCQSCRKNFHGVAVTAPVKDDDQKNEYYWCKTSVPLMYREKEDINNNENMMMGGGGERLG* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0729 228 ProSiteProfiles dnaJ domain profile. 69 137 IPR001623 -
Lan18g0729 228 CDD DnaJ 69 126 IPR001623 -
Lan18g0729 228 Pfam DnaJ domain 69 133 IPR001623 -
Lan18g0729 228 SUPERFAMILY Chaperone J-domain 61 136 IPR036869 -
Lan18g0729 228 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 218 - -
Lan18g0729 228 Gene3D DnaJ domain 53 146 IPR036869 -
Lan18g0729 228 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0729 Lan-Chr18 12632777 12634893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0729 8 198 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 32.051 1.18e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0729 - - lang:109333433 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0571 17 4696257 4697586 Lan18g0729 18 12632777 12634893 LSH
Lan18g0729 18 12632777 12634893 Lan6g0548 6 4795182 4796204 LSH
Lan18g0729 18 12632777 12634893 Lan17g1196 17 20269144 20270356 PCT
Lan17g1196 17 20269144 20270356 Lan18g0729 18 12632777 12634893 PCT