Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0725 ATGGCTGATGATAGCTTGGACCCTGCCACCTCAAGCCTTCTTTGTTGTGAGGACAACAGCACATGTTTTGATGATGATGATTTAGAATTTAATGATGTTGTTGGGTCTAGGATCTTACCTTTCTGGGCCCACACAAACCTTAACTCTTTCAATCAATGTCCAAGTTTTGTGTTACAGAGTGAGGAAACTGTGAGGGTTATGATTGAGAGGGAGAGGGAGCATTTGCCCAGGGATGATTACCTCAACAGGCTGAGGAGTGGGGATTTGGACATGAGTGTTAGGAGAGAAGCTATTGATTGGATTTGCAAGGGGCATGCTTACTATGGTTTTGGATATTTGACCTTTTGTCTCGCTGTGAACTACTTGGATCGCTTCCTCTCTGCTTATGAATTGCCTAGAGGCAAAAGTTGGACAGGACAACTGCTAGCGGTTGCATGCTTATCAATTGCCGGTAAAATGGATGAGATTAAAGTGCCCCAATCTATAGATTTACAGGTTGGAGAACCAAATTTTTTCTTTGATGGTAAAACCATTCAAAGAATGGAACTATTGGTGTTATGCACATTGAGATGGAAAATGCATGCTTTAACTCCATGTTCCTTCATAGACTACTTCCTAAGTAAGATCACTTATGAGAAGCAACCAACTAAGCCTTTCATTTCAACATCGATCCAGCTCATAGTTAGCATAATCAGAGGTATTGACTTCTTGGAATTCAGGCCTTCTGAAATTGCAGCAGCAGTGTCAATTTATGTTACAAGGGAAGCGCAAGCGAAAGATATCGACAAGGCCATTGTTGGTTTTTCCATTGTTGAGGAGGAGAGAGTTCTAAAGTGTGTTGAATTGATCAGAGATTTGTCCTTCAATGTTTCTGCTAATTTGGGCAGTAGTAATAACTATGCACCATGTGTGCCCCAAAGCCCGGTTCGGGTTCTGGATACTAGATGCTTAAGCTTTAAGAGTGATGAATTAACACTTGGGTCATGTCCAAATACTTCACTTAATATTCCAGATACTAAGATGGAAAAATCAGATAGACCTTCTTACAATGGAGCTTTTTCAAGTCTATGA 1071 0.408 MADDSLDPATSSLLCCEDNSTCFDDDDLEFNDVVGSRILPFWAHTNLNSFNQCPSFVLQSEETVRVMIEREREHLPRDDYLNRLRSGDLDMSVRREAIDWICKGHAYYGFGYLTFCLAVNYLDRFLSAYELPRGKSWTGQLLAVACLSIAGKMDEIKVPQSIDLQVGEPNFFFDGKTIQRMELLVLCTLRWKMHALTPCSFIDYFLSKITYEKQPTKPFISTSIQLIVSIIRGIDFLEFRPSEIAAAVSIYVTREAQAKDIDKAIVGFSIVEEERVLKCVELIRDLSFNVSANLGSSNNYAPCVPQSPVRVLDTRCLSFKSDELTLGSCPNTSLNIPDTKMEKSDRPSYNGAFSSL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0725 356 SMART Cyclin_C_2 196 318 IPR004367 -
Lan18g0725 356 PANTHER CYCLIN-D4-1-LIKE 48 343 - -
Lan18g0725 356 Gene3D - 67 282 - -
Lan18g0725 356 SMART cyclin_7 99 187 IPR013763 -
Lan18g0725 356 PANTHER CYCLINS 48 343 IPR039361 -
Lan18g0725 356 Gene3D - 77 194 - -
Lan18g0725 356 CDD CYCLIN 94 186 IPR013763 -
Lan18g0725 356 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Lan18g0725 356 Pfam Cyclin, C-terminal domain 197 289 IPR004367 -
Lan18g0725 356 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Lan18g0725 356 SUPERFAMILY Cyclin-like 55 194 IPR036915 -
Lan18g0725 356 MobiDBLite consensus disorder prediction 337 356 - -
Lan18g0725 356 SUPERFAMILY Cyclin-like 179 288 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0725 Lan-Chr18 12583063 12585732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0725 1 264 Core Cell Cycle Gene Families AT5G65420 49.248 1.98e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0725 K18810 - gmx:100794010 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0725 18 12583063 12585732 Lan6g0553 6 4821285 4823954 LSH
Lan18g0725 18 12583063 12585732 Lan18g0037 18 269483 271987 PCT
Lan18g0037 18 269483 271987 Lan18g0725 18 12583063 12585732 PCT