Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0716 ATGGTCGGGTCCTCACAACCCGATCCTAAATCCACTATCAAATTCCTCTGCAGCTACGCCGGAAAGATCCTCCCCCGCCATCCCGACGGCAAGCTCCGCTATGTCGGCGGCCATACCCGCGTCCTCGCCGTTAATCGTACCATTCCATTTGCCGAATTGTTGTTGAAACTGGAAGAACTGTGTGGAACTTCCGTGAGGCAACTTCGCTGTCAGTTACCAGCGGAAGATCTCGACGCTTTGGTATCCATAAGCTCCGATGAGGATCTCGCAAATCTCATCGAGGAATACGATCACGCGCCGTCACCGTCGTTGAAGGTCAGAGTATTCCTCTCACCACCGAGATCTCTGAACAAGGTTTCCATGCCTCCGTCACCGTCTCTGTCAAAATCAACCTCCTCCACATCCTCTACCTCCTCGTCAACTTCGTCGTCATCATCACATCACAGTGCTACCGGTGGCGGTTCTGGTTTGAACTCTGGCCGTAGTTTGAAGTCAGTGGCGCCGGTGATAAACCGCTGTGTCCATCAGATATCGGCGGCGGCGGCATATCCAGTTGGTGTGGAGAAAAAATCTAGTGGGATTCAGAGGATTATTCCTCATCCCCGCTACGGTTACCATATCCAAGGTCAAGGGAAGACTTGCCACGCTGGCCATATTTATCTGACTCACAACAACAACAACCACTGGCAATAG 693 0.5224 MVGSSQPDPKSTIKFLCSYAGKILPRHPDGKLRYVGGHTRVLAVNRTIPFAELLLKLEELCGTSVRQLRCQLPAEDLDALVSISSDEDLANLIEEYDHAPSPSLKVRVFLSPPRSLNKVSMPPSPSLSKSTSSTSSTSSSTSSSSSHHSATGGGSGLNSGRSLKSVAPVINRCVHQISAAAAYPVGVEKKSSGIQRIIPHPRYGYHIQGQGKTCHAGHIYLTHNNNNHWQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0716 230 Pfam PB1 domain 29 109 IPR000270 GO:0005515
Lan18g0716 230 SUPERFAMILY CAD & PB1 domains 29 121 - -
Lan18g0716 230 SMART PB1_new 27 111 IPR000270 GO:0005515
Lan18g0716 230 Gene3D - 31 111 - -
Lan18g0716 230 CDD PB1_UP2 16 110 - -
Lan18g0716 230 MobiDBLite consensus disorder prediction 115 159 - -
Lan18g0716 230 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 6 229 - -
Lan18g0716 230 MobiDBLite consensus disorder prediction 120 159 - -
Lan18g0716 230 PANTHER OS05G0427100 PROTEIN-RELATED 6 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0716 Lan-Chr18 12427035 12428851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0716 8 110 MAP Kinase Kinase Kinase AT5G57610 51.887 3.36e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0716 - - lang:109349167 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0716 18 12427035 12428851 Lan6g0563 6 4952634 4954369 LSH