Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0705 ATGGCTTCTTCTCTATCTCAACTTCTTTTTTCTCTTCTCCTCCTTCTGTTGGCAACTTCATTAGTTAATGTGTTCTCCTCTAAAGCTTCAACTAAATCATCAACCTACATGGAACCATTTAAGTGTTCTGCAAAGATCATGTCATGCAACGCCTCACTCTACCACATAAGCTATGGTATCAATATAGAAGAAATAGCTTCTTTTTATTCTGTTAGTCCTTCTCAAATCAAACCCATAATGCGTGGCACCAAACAAGATTACCTCATAACAGTACCTTGTTCTTGCAAAAAAACCATAGACCTTAGTGGATATTTCTATGATGCAACCTACAAGGTGAACCCAAATGATAGTTTTTTGGACATAAAAACCATGATTTATAGTGGCCAAGCATGGCCTAATAATAGTGTATTGGTTTCAAATGAGAATTTAGTAATACATATTCCATGTGGGTGTTCCGAAAGTGATTCTCAAATTGTTGTAACATATACAGTCCAGTGGAGTGATACACCAACGTCTATTACTAATCTGCTAAATGCAACATTTGATGGTTTGGTCAGTATGAACCAAGTTCTGAATCAAAACCCATCATTCATAGATATTGGTTGGGTGATATTTGTTCCTATGGAATTGAATGGGCTTCCACAGCCCAATGGAAAAGGAAAAAAACACATTTGGGTAATAATCATTGGGATTTTAGCAGGTGTGGCATCACTTTCAATTATTACAATGATCTTTCTCATTTTCGGGAGGAAAAAACCCTATGAAACTAGCGAAGACGGTCCAAACATTGTCTCCAAGAGATCAATTGCCAATAGAACTATTTCCTTGAAGAACCAATTTCATAGAGAATCTTTGGAAGGACAATTTGAAACAGAAAGACCAGTAGTTTATACTCTTGAGGAGATCGAAGATGCTACAAATAACTTCGATGAAACTCGAAAGATTGGAGTTGGTGGATATGGGGAGGTATATTTTGGAATGTTAGAAAAGGAGGTTGCTGTGAAGAAGATGAAGTCTACTAAATCTAAAGAATTCTATGCAGAACTCAAGGCCTTATGTAATATCCATCATATTAACATTGTAGAGTTGTTGGGATATGCTAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGAACATCTTCAAGATCCATTGCTGAAAGGTCACCAGCATCTTTCTTGGTGTGCTAGGACTCAGATTGCATTAGATGCAGCAAAAGGTCTTGAATACATACATGATTATACGAAATCACGATATGTTCACCGTGATGTAAAGACAAGCAATATTCTTCTTGATGAGAAGCTTAGAGCAAAGGTGGCAGATTTTGGACTTGCAAAGCTAGTAGAACGGACAAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCAGGCTATCTTCCACCAGAATCTCTGAAGGAGCTTCAGGTAACCGTAAAAACCGATGTATTTGCATTTGGAGTAGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTGTTTCGTGACAGCAAAGAAACCACCAAAATGAAATCGCTTATTGCAGTAGTTAATGGTATATTCCTAGACGATGAGCCAGAGGCTGCTTTACAAGAAGTCATTGATGTGAATCTTCAAAGTAACTATCCTGTAGAAGATATCTACAAGATGGCAGAGCTAGCTCACTGGTGCATGCGCGAAGATCCAGTGGACAGGCCTGAAATGAGGGAGGTTGTTGGCACATTATCACAGATTGTGATGTCCTCTATAGAGTGGGAAGCATCACTAGGTGGAGACAGCCAGGTTTTTAGTGGAGTATTTAATGGTAGATGA 1839 0.3855 MASSLSQLLFSLLLLLLATSLVNVFSSKASTKSSTYMEPFKCSAKIMSCNASLYHISYGINIEEIASFYSVSPSQIKPIMRGTKQDYLITVPCSCKKTIDLSGYFYDATYKVNPNDSFLDIKTMIYSGQAWPNNSVLVSNENLVIHIPCGCSESDSQIVVTYTVQWSDTPTSITNLLNATFDGLVSMNQVLNQNPSFIDIGWVIFVPMELNGLPQPNGKGKKHIWVIIIGILAGVASLSIITMIFLIFGRKKPYETSEDGPNIVSKRSIANRTISLKNQFHRESLEGQFETERPVVYTLEEIEDATNNFDETRKIGVGGYGEVYFGMLEKEVAVKKMKSTKSKEFYAELKALCNIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLQDPLLKGHQHLSWCARTQIALDAAKGLEYIHDYTKSRYVHRDVKTSNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESLKELQVTVKTDVFAFGVVLSELITGKRALFRDSKETTKMKSLIAVVNGIFLDDEPEAALQEVIDVNLQSNYPVEDIYKMAELAHWCMREDPVDRPEMREVVGTLSQIVMSSIEWEASLGGDSQVFSGVFNGR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0705 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Lan18g0705 612 ProSiteProfiles Protein kinase domain profile. 309 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0705 612 ProSitePatterns Protein kinases ATP-binding region signature. 315 336 IPR017441 GO:0005524
Lan18g0705 612 ProSiteProfiles LysM domain profile. 160 206 IPR018392 -
Lan18g0705 612 Pfam Protein kinase domain 310 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0705 612 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 19 612 - -
Lan18g0705 612 SUPERFAMILY LysM domain 160 207 IPR036779 -
Lan18g0705 612 Gene3D Phosphorylase Kinase; domain 1 279 379 - -
Lan18g0705 612 Gene3D Transferase(Phosphotransferase) domain 1 380 597 - -
Lan18g0705 612 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 612 IPR044812 GO:0019199|GO:0045087
Lan18g0705 612 SUPERFAMILY Protein kinase-like (PK-like) 294 587 IPR011009 -
Lan18g0705 612 SMART serkin_6 309 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g0705 612 Gene3D LysM domain 153 211 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0705 Lan-Chr18 12329843 12334088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0705 286 612 Receptor kinase-like Gene Family AT1G51940 53.293 1.70e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan18g0705 Pkinase 4.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0705 - - gmx:100800907 881.708