Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0693 ATGATGATAATTGATTATGAATATCCAACTTCAACTATAAATACTCCCTTGTGTCAAATGAGCTACACCCTCAATCTCTCTCTCACTCTCTATCTTTCTTGTTCTCTCTCTCACATATCCAACCTCTTCTACAGATTCAGACACACTCCCATGTCAACAATGAACCATCTTTTTGATCTTCCAGACCAGATATGTTATATACAATGTGGATTCTGTACCACAATTTTGATGGTAAGTGTTCCATGCAGTAGTATGTCAATGGTGGTTACAGTAAGATGTGGGCACTGCACAAGTCTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTACACCTTTTAGCATCACTTAGTAATCTTGAGCCAAAAGAATGCAGTCCAGAAGAGGATATGAACAAGACTTTGAACAACTCTAATGCTTCCATGATGACTTATTCTGATTGTGAGGAAGAGGATGTGATTCCAATTAACAATGTTGTGAATAAACCCCCAGAAAAGAGACAAAGAACACCATCAGCTTATAACCGCTTTATCAAGGAAGAGATCAAGAGGCTAAAGGCTGAACACCCTGATATGGCCCACAAGGAAGCTTTCAGTACAGCTGCAAAGAATTGGGCTAATTCCCCTCCAACTCAATGCAAAGGGGATGAAGAAAGTTGTAGCCAGACAGAGCCACTTCTGGATCTAGACTCCCATTTGGATCCTAATGATGCTGAGGTGAATGAAGAAGGTCAAGGTTTCCGTGGAAGAAAGGTTCCAAGGAATTCTATCTTGGGAAGGATGCCATTCAATTGA 798 0.4035 MMIIDYEYPTSTINTPLCQMSYTLNLSLTLYLSCSLSHISNLFYRFRHTPMSTMNHLFDLPDQICYIQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLSNLEPKECSPEEDMNKTLNNSNASMMTYSDCEEEDVIPINNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAEHPDMAHKEAFSTAAKNWANSPPTQCKGDEESCSQTEPLLDLDSHLDPNDAEVNEEGQGFRGRKVPRNSILGRMPFN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0693 265 Pfam YABBY protein 61 213 IPR006780 GO:0007275
Lan18g0693 265 MobiDBLite consensus disorder prediction 206 220 - -
Lan18g0693 265 SUPERFAMILY HMG-box 159 212 IPR036910 -
Lan18g0693 265 PANTHER PROTEIN YABBY 6-RELATED 51 225 IPR006780 GO:0007275
Lan18g0693 265 MobiDBLite consensus disorder prediction 206 265 - -
Lan18g0693 265 Gene3D High mobility group box domain 160 219 IPR036910 -
Lan18g0693 265 MobiDBLite consensus disorder prediction 231 250 - -
Lan18g0693 265 PANTHER AXIAL REGULATOR YABBY 4 51 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0693 Lan-Chr18 12181018 12183092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0693 26 264 C2C2-YABBY Transcription Factor Family AT1G23420 53.817 3.38e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan18g0693 YABBY 3.5e-60 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0693 K25796 - gmx:100806755 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0693 18 12181018 12183092 Lan6g0580 6 5106403 5108907 LSH