Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0692 ATGTTGGGTGGTAACAATGGCAATCCTGTGCTTCCGGTTTTCCTTGACGAGACCCAGTTTCGGTATCAAACTAATGCAGCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGCTGGAAGTGGTGTTGATCCAGTTAATTACTTCGGAAATGAGCACATGAGTTCCATGATTCAGCCTAATAAACGGAGCAGGGAAATTGAAGATATCTCAAAGCAGCAAAAGCTTCAGATTTCTTTAAATTACAACATCTGTCAAGATGATGGTAATCGGCCAGGAAGCATTCCAAGCCGTAACCCTGTGTCAACAGGATTGAGGCTTTCTTATGATGATGATGAGCGTAACTCTTCTGTCACATCTGCCAGTGGCAGTATGAGTGCCCCACCTTCAGTCATGTTGTCCCTCGGTGACAATATCAGAACTGAGCTTGATAGGCAGCAAGATGAGTTGGACCAGTATATTAAACTTCAGAAGGAACAATTGTCAAAAGGAGTAAGAGACATGAAGCAGAAGCACATGGCTTTTCTCCTTACTTCCATTGAGAAAGGTGTTAGTAAGAAGCTAAGGGAAAAAGATGTGGAGATAGAGACCATGAACCGAAAGAATAGGGAGCTAGCCGAGAGAATAAAACAGGTAGCTATTGAAGCACAAAACTGGCACTACAAAGCAAAGTATAATGAGTCAGTTGTGAATGTGTTACGGAACAATCTCCAGCAGGCAATTTCACAAGGAGTTGAACAAGGGAAGGAAGAAGGTTTCGGAGACAGCGAAGTTGACGATGCTGCTTCATACATAGATCCCAATAACTTCCTGAGCATCCCAGGTGCGCCTACGAAATCTACTTTCAAGAGCTACCAAGGCATGGAGAATCTGAGTTGCAGGGCATGCAAGACAAAGGAGGTTTCTATGTTGTTGATACCTTGTAGGCACCTGTGCTTGTGTAAGAACTGTGATGGGTTTATCAATGTTTGTCCTGTATGCCAATTGATAAAAACTGGAAGTGTAGAGGTCTATCTGTCTTAA 1020 0.4275 MLGGNNGNPVLPVFLDETQFRYQTNAANQLQLFGNLQAGSGVDPVNYFGNEHMSSMIQPNKRSREIEDISKQQKLQISLNYNICQDDGNRPGSIPSRNPVSTGLRLSYDDDERNSSVTSASGSMSAPPSVMLSLGDNIRTELDRQQDELDQYIKLQKEQLSKGVRDMKQKHMAFLLTSIEKGVSKKLREKDVEIETMNRKNRELAERIKQVAIEAQNWHYKAKYNESVVNVLRNNLQQAISQGVEQGKEEGFGDSEVDDAASYIDPNNFLSIPGAPTKSTFKSYQGMENLSCRACKTKEVSMLLIPCRHLCLCKNCDGFINVCPVCQLIKTGSVEVYLS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0692 339 Coils Coil 187 214 - -
Lan18g0692 339 Pfam Zinc finger, C3HC4 type (RING finger) 289 327 - -
Lan18g0692 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 338 IPR017066 -
Lan18g0692 339 MobiDBLite consensus disorder prediction 86 103 - -
Lan18g0692 339 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 338 - -
Lan18g0692 339 MobiDBLite consensus disorder prediction 86 129 - -
Lan18g0692 339 PIRSF SBP1_RNase_bind 1 339 IPR017066 -
Lan18g0692 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 339 IPR013083 -
Lan18g0692 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
Lan18g0692 339 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0692 Lan-Chr18 12167209 12171284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0692 277 337 C3H Transcription Factor Family AT1G73950 36.508 1.76e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0692 K19042 - gmx:100791550 570.852